Rv2477c - p.Tyr331Phe
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
25 Sensitive
4 RR-TB
34 HR-TB
13 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 7 |
| lineage4.9 | 50 |
| La2;lineage4.9 | 1 |
| lineage4.1 | 1 |
| 8 | |
| lineage6 | 1 |
| lineage5.2 | 2 |
| lineage1.1.1 | 1 |
| La3;lineage4.9 | 5 |
| lineage4.3.4.1 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.9 | 9 |
| lineage4.3.4.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8 | 3 |
| lineage4.6.2.2 | 4 |
| lineage4.1.2.1 | 5 |
| lineage4.9;lineage9 | 1 |
| lineage6.3.1 | 1 |
| lineage4 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.5 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage3 | 1 |
| lineage4.6.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 135 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181020 | Other | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR7535086 | Other | None | SRR29096659 | Sensitive | lineage4.9 | None | ERR9117721 | HR-TB | None | ERR9787165 | Other | lineage6 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9786843 | Other | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4797201 | Other | None | ERR4800341 | Other | None | SRR29050859 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4817893 | Other | lineage4.8 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR13285192 | Sensitive | lineage4.9 | None | SRR29055611 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675522 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR12015083 | Other | lineage4.8 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR702406 | Other | lineage2.1 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4798823 | HR-TB | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
|---|
