Rv3696c - p.Pro354Ala
Drug resistance types
1 Sensitive
4 RR-TB
22 HR-TB
6 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.9 | 15 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2 | 2 |
| lineage4.8 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None |
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