Rv0006 - c.-179C>G
Drug resistance types
94 Sensitive
3 RR-TB
43 HR-TB
9 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
84 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 135 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4 | 5 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| La1.8.2 | 2 |
| lineage4.8 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 2 |
| La3;lineage4.3.4 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.8.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| 2 | |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 4 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.9 | 4 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR363498 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR7851333 | Other | La1.8.2 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR7851376 | Other | La1.8.2 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR3797073 | Other | La1.8.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR926157 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR13265833 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1465946 | Sensitive | lineage4.8 | ch | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363447 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR137286 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
|---|
