lineage | Count |
---|---|
40 | |
lineage9;lineage3.1 | 1 |
lineage4 | 10 |
lineage2.1 | 1 |
lineage4.9 | 2 |
La2 | 1 |
lineage2.2.1 | 5 |
lineage4.3.4.1 | 1 |
lineage3 | 1 |
lineage3.1.2 | 1 |
lineage4.3.4 | 1 |
lineage4.3.2.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | ERR158583 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675550 | Other | None | SRR3675502 | Other | None | SRR3675501 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR1035162 | Other | None | ERR1035138 | MDR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | ERR1023509 | Other | None | SRR5341313 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046824 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR1063862 | HR-TB | None | ERR067681 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR3445503 | HR-TB | None | ERR400529 | Other | lineage3 | None | ERR4798406 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR987722 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR1172310 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1174897 | HR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None |
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