Rv1173 - c.2139G>C


Drug resistance types
6 Sensitive 0 RR-TB 105 HR-TB 13 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 72 Other
lineage Counts
lineage Count
124
lineage4.3 1
lineage4.9 13
lineage4 6
lineage2.2.1 12
lineage4.8;La3 1
lineage4.4.1.1 1
La1.8.1 1
La2 1
lineage4.6.2.2 5
lineage2.2 5
lineage5.2 2
lineage4.7 1
lineage4.1.3 2
lineage3 4
lineage2 2
lineage1.2.2.2 1
lineage3.1.2 1
lineage4.6.1.1 1
La1 1
lineage4.3.4.2.1 1
lineage1.1.2 1
lineage6 1
lineage6.3.1 1
lineage4.8;lineage4.1 2
lineage4.1.2.1 2
lineage3.1 1
lineage4.5 1
lineage4.9;La3 1
lineage9;lineage3.1 1
lineage6.3;lineage2.2.1 1
lineage4.1.1 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675221 HR-TB None
SRR3675236 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675234 Other None
SRR3675284 HR-TB lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
ERR181887 HR-TB None
ERR176643 HR-TB None
ERR176651 HR-TB None
SRR3675502 Other None
SRR3675456 HR-TB None
ERR176751 HR-TB None
ERR212001 HR-TB None
SRR3675510 Other None
ERR2027263 Other lineage4 None
SRR3675550 Other None
ERR212123 Other None
SRR3675555 HR-TB None
ERR212125 HR-TB lineage4 None
SRR6045233 HR-TB None
ERR212121 HR-TB None
ERR4816466 HR-TB None
SRR3675571 HR-TB None
ERR502912 Other lineage2.2.1 None
ERR4817893 Other lineage4.8;La3 None
SRR7496472 Other None
ERR234659 HR-TB None
SRR5341302 HR-TB None
ERR2693239 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
SRR6044790 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341418 Other None
ERR1035138 MDR-TB None
ERR2515228 Other lineage2.2.1 None
ERR2693231 Other None
SRR6045519 HR-TB None
ERR4821365 Other La1.8.1 None
SRR6044838 Other lineage4.9 None
ERR2693232 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6045399 Other None
SRR6046225 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6325444 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046397 Other None
SRR6046540 HR-TB None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6325448 HR-TB None
SRR6046644 HR-TB None
SRR6046824 HR-TB None
ERR502524 HR-TB La2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR502889 Other None
ERR502532 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
ERR323039 HR-TB None
SRR7496523 Other lineage4.7 None
ERR5311090 HR-TB None
SRR8217918 HR-TB None
SRR7496509 Other None
ERR323053 HR-TB None
ERR323043 HR-TB None
ERR3797015 HR-TB None
ERR133986 HR-TB None
ERR3283014 HR-TB None
ERR3283024 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3439432 Other None
ERR3445503 HR-TB None
ERR067681 HR-TB None
ERR1034652 Other None
ERR1063859 HR-TB None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3797014 Other None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797061 Other None
ERR3797044 Other None
ERR3797048 HR-TB None
ERR3797058 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797064 Sensitive None
ERR387051 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4797588 MDR-TB lineage3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797201 Other lineage1.2.2.2 None
ERR403298 HR-TB lineage4 None
ERR4407463 HR-TB None
ERR6358991 HR-TB None
ERR4798406 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR4798262 HR-TB La1 None
ERR4811022 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR6359045 HR-TB None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR736835 HR-TB None
ERR736867 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736874 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
SRR1172951 Other None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786843 Other None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
SRR1167384 Other lineage4 None
SRR1172234 Other None
SRR1172817 HR-TB None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR990545 Other lineage3 None
SRR1169194 Other None
SRR1172310 HR-TB None
SRR1172728 MDR-TB None
SRR1173153 HR-TB None
SRR1173633 HR-TB lineage4.9 None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other None
SRR1174897 HR-TB None
SRR1181020 Other lineage2.2.1 None
SRR1196494 MDR-TB None
SRR1184294 HR-TB None
SRR1184381 MDR-TB None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183144 Other lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196768 MDR-TB None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR15368973 Other None
SRR13423649 Sensitive lineage2.2.1 None
SRR17658565 Other lineage3 None
SRR1640750 HR-TB None
SRR18910194 HR-TB lineage2.2 None
SRR18213713 HR-TB lineage4.5 None
SRR26399973 Other lineage4.9;La3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
ERR158583 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176779 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR176778 HR-TB None
SRR3675465 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR181744 HR-TB None