SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
SRR3675555
|
HR-TB
|
lineage2.1;lineage4.9;lineage7
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR11082850
|
Sensitive
|
lineage4
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR11488822
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.2.1
|
None
|
SRR1184024
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR11043567
|
Sensitive
|
lineage4
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR6046382
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR4819969
|
Sensitive
|
lineage4
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|