Rv1221 - c.435G>C


Drug resistance types
46 Sensitive 11 RR-TB 65 HR-TB 23 MDR-TB 3 Pre-XDR-TB 4 XDR-TB 105 Other
lineage Counts
lineage Count
La1.8.1 1
La3;lineage4.9 9
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.1;lineage4.9 7
La2;lineage4.9 2
lineage4.9 73
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1 9
La1;lineage2;lineage4.9 1
lineage2.2.2;lineage4 1
lineage4.3.2.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4 1
10
lineage4.1.3 2
lineage3 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.1;lineage6.3 2
lineage4.4.1.2 1
lineage6.1.1 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.8;lineage4.9 2
lineage4.2;lineage4.9 2
lineage4.3.4.2.1 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4.9;lineage6.3 7
M.canetti;lineage2.2 2
M.canetti;lineage4.6.4;lineage4.9 2
La1.7;M.canetti;lineage4.9 3
lineage4.1.2.1 2
La3;lineage2.1;lineage6.3 1
lineage4.3.4 1
M.canetti;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4 1
La1.7;lineage4.9;lineage7 3
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7;lineage4.9 7
lineage2.2.1;lineage3 1
lineage4.9;lineage9 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.8 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 3
lineage3.1 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.9.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage1.1.1;lineage4 1
La1.2.BCG 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.6.2.2 2
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage3.1;lineage9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7.1 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2 2
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7 2
lineage1;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.1.1.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage2.2.1 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.9 1
lineage2.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;lineage2 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 257
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675236 Other None
SRR26399265 Other lineage2.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4800341 Other lineage3 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR9117709 Other None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675246 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR9786843 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3797087 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4811030 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR502511 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR736848 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR3675461 RR-TB lineage4.9 None
SRR6789626 Other None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR11049020 Other lineage4.8 None
ERR212138 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675441 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797070 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR3797079 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR400529 Other lineage3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1063896 Sensitive None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR108125 RR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
SRR3675235 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR926158 Sensitive lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798504 RR-TB lineage3 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR28119753 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR926154 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9787153 Other lineage6.1.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR9786645 Other lineage4.6.2.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR25827682 Other None
ERR4797313 Sensitive lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4815752 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR3797029 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9119669 HR-TB lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None