Rv0529 - c.390C>T
Drug resistance types
13 Sensitive
1 RR-TB
0 HR-TB
17 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 22 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 10 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28393999 | MDR-TB | lineage4.1.2.1 | None | SRR28393386 | MDR-TB | lineage4.1.2.1 | None | SRR28394029 | MDR-TB | lineage4.1.2.1 | None | ERR7910892 | MDR-TB | lineage4.1.2.1 | pe | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR751632 | MDR-TB | lineage4.1.2.1 | pe | ERR779920 | MDR-TB | lineage4.1.2.1 | pe | ERR12268357 | Sensitive | lineage1.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4813397 | MDR-TB | lineage4.1.2.1 | pe | ERR4812594 | MDR-TB | lineage4.1.2.1 | pe | SRR16370466 | MDR-TB | lineage4.1.2.1 | None | ERR4813285 | MDR-TB | lineage4.1.2.1 | pe | ERR4813700 | MDR-TB | lineage4.1.2.1;lineage4.3.3 | None | ERR2516405 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516451 | MDR-TB | lineage4.1.2.1 | pe | SRR28393267 | MDR-TB | lineage4.1.2.1 | None | ERR6866807 | RR-TB | lineage4.9 | None | SRR10808461 | Sensitive | lineage4.1.2.1 | None | ERR4829278 | Sensitive | lineage1.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4813359 | MDR-TB | lineage4.1.2.1 | None | ERR2516698 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR19115675 | Sensitive | lineage1.1.1 | None | ERR11050953 | Sensitive | lineage1.1.1 | None | SRR16370298 | Other | lineage1.1.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR779924 | MDR-TB | lineage4.1.2.1 | pe | ERR7902716 | Sensitive | lineage1.1.1 | None | ERR1334050 | Sensitive | lineage1.1.1 | gh | ERR9119669 | MDR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR751577 | MDR-TB | lineage4.1.2.1 | pe | ERR234194 | Sensitive | lineage1.1.1 | None | SRR7131254 | Sensitive | lineage1.1.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR6865984 | Sensitive | lineage4.1.2.1 | None | ERR2184542 | Sensitive | lineage4.1.2.1 | pe | ERR028332 | Sensitive | lineage1.1.1 | None | ERR2516597 | XDR-TB | lineage4.1.2.1 | pe | ERR4024775 | Sensitive | lineage4.1.2.1 | None |
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