Rv1484 - c.558G>C


Drug resistance types
12 Sensitive 4 RR-TB 47 HR-TB 11 MDR-TB 5 Pre-XDR-TB 3 XDR-TB 114 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 10
lineage2.1;lineage4.9 10
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.8 2
lineage4.1.2.1 7
lineage4.9 48
lineage2.2.1 8
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La3;lineage2 1
lineage2.1;lineage4.9;lineage6.3 10
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage4.9 10
lineage3 5
La1.7;lineage4.9 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 1
La1.7;lineage3.1;lineage4 1
13
lineage3.1.2.2 1
lineage2.2.2;lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 3
M.canetti;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.2 1
La1.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage5.2 2
M.canetti;lineage2.2 2
lineage3.1;lineage9 1
lineage2.2 2
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La1.7.X-unk4;lineage4.9 1
La3;lineage1.1.2 1
lineage2.2.2 1
lineage4 2
lineage2.2.1;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.1.3 2
lineage1.2.2.2 1
lineage2.1;lineage6.3 2
lineage4.6.2.2 1
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage2.1;lineage4.9 2
La3;M.canetti;lineage2.2.1 1
La2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
La3 2
lineage1.1.3.1 1
M.canetti;lineage2.1;lineage6.3 1
La1.2.BCG 1
lineage4.3.2;lineage4.9 1
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 196
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR13265528 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1169194 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4816999 Other None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR29093909 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR23961542 Other La1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR26159035 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
SRR3675449 Other M.canetti;lineage4.9 None
ERR176751 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR5311094 HR-TB lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR23961549 Other La1.2 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR2514692 Other None
ERR9787197 Other None
ERR234659 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR18213713 HR-TB None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4816585 Other lineage2.2 None
ERR4815604 Other None
SRR18910194 HR-TB lineage2.2.2 None
ERR2027263 Other lineage4 None
ERR212123 Other lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6789626 Other None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR28119753 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR7535086 Other None
SRR26399265 Other lineage2.2.1 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4797201 Other lineage1.2.2.2 None
ERR4800341 Other lineage3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR3797070 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR9786604 Other None
SRR17832802 HR-TB lineage3 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR6044875 Sensitive lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1169249 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR29097058 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR3283044 Other lineage4 None
ERR4872094 MDR-TB lineage5.2 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1172817 Other La3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR29097037 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675457 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None