Rv1484 - c.558G>C
Drug resistance types
12 Sensitive
4 RR-TB
44 HR-TB
10 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| 24 | |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9 | 48 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| La3;lineage4.9 | 10 |
| lineage4.1.3 | 2 |
| lineage3 | 3 |
| lineage2.2.1 | 11 |
| lineage5.2 | 2 |
| lineage4.8 | 3 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3 | 2 |
| lineage2.1;lineage4.9 | 10 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage4.1.2.1 | 5 |
| La1.7;lineage4.9 | 4 |
| lineage4.9;lineage6.3 | 10 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.1 | 2 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| La1.2 | 1 |
| M.canetti;lineage2.2 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 188 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815604 | Other | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3797069 | Other | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1173384 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358991 | HR-TB | None | ERR161037 | Other | lineage4.9 | None | ERR4811142 | RR-TB | None | ERR4798504 | RR-TB | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR176751 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR10808730 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR212123 | Other | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800341 | Other | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR29050859 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR6789626 | Other | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR29093909 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR12006550 | Sensitive | None | SRR12416824 | HR-TB | None | ERR3283044 | Other | lineage4 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR7535086 | Other | None | ERR9117721 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR9117709 | Other | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR23961549 | Other | La1.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR9787197 | Other | None | ERR234659 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786604 | Other | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675214 | Other | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4797201 | Other | None | SRR29097058 | Other | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR6358755 | Other | lineage4.6.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR4817893 | Other | lineage4.8 | None | SRR1165699 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR26159035 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
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