Rv1644 - c.-162C>T


Drug resistance types
9 Sensitive 10 RR-TB 32 HR-TB 21 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 44 Other
lineage Counts
lineage Count
La3;lineage4.9 4
lineage4.9 46
lineage4.6.2.2 2
lineage4.1.1.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 2
lineage5.2 2
lineage4.9;lineage7 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1.1 2
lineage2.2.1 4
lineage1.1.3.1 1
M.canetti;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage4.2;lineage4.9 2
lineage4.3.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1;lineage4.8 2
La1.6;La3;lineage4.9 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9.1 1
lineage4.2;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.8 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 1
lineage2.1;lineage4.9 1
lineage4 1
1
lineage3.1;lineage9 1
La1.7;M.canetti;lineage4.9 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.X-unk4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 119
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176643 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR10808730 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR926155 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR3797029 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20958096 Sensitive lineage4.3.3 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR926160 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR323037 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR3797046 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR971389 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR6045503 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
ERR9786843 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046046 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR926162 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None