lineage | Count |
---|---|
45 | |
lineage4.4.1.1 | 1 |
lineage3.1 | 1 |
lineage4 | 3 |
La2 | 1 |
lineage4.9 | 6 |
lineage6.1.1 | 2 |
La1.8.1 | 1 |
lineage3.1.2 | 1 |
La1.2 | 1 |
lineage3 | 1 |
lineage1.1.1 | 3 |
lineage4.1.2.1 | 2 |
lineage4.6.1.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage2.2.1 | 4 |
lineage4.8 | 2 |
lineage2.2 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046492 | Other | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046644 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR323039 | HR-TB | None | ERR4831117 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323053 | HR-TB | None | ERR1034652 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR3283024 | Other | None | ERR3797061 | Other | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR4769450 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4187734 | Other | La1.8.1 | None | ERR4769452 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798504 | Other | lineage3 | None | ERR736865 | HR-TB | None | ERR736839 | Other | None | ERR9787014 | Other | lineage6.1.1 | None | ERR751690 | Other | lineage1.1.1 | th | ERR9786515 | Other | lineage4.1.2.1 | None | ERR751889 | Other | lineage1.1.1 | th | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR067508 | MDR-TB | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR18213662 | Other | lineage4.8 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR14801746 | Other | lineage4.8 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675270 | HR-TB | None | SRR3675234 | Other | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | SRR4035594 | Other | lineage4.3.4.2.1 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR5341330 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2514692 | Other | None | SRR5341470 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045519 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5710001 | Other | lineage1.1.1 | th | ERR2693232 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6046397 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None |
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