lineage | Count |
---|---|
lineage2.2.1 | 8 |
lineage4.8 | 19 |
lineage4.9 | 6 |
lineage4.8.1 | 2 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.4.1.1 | 2 |
lineage4.1.1.1 | 3 |
lineage4.8.2 | 1 |
lineage4.7 | 1 |
lineage4.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage1.2.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.3 | 2 |
lineage4.1.1.3.1 | 2 |
lineage4.4.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.2.2.2 | 2 |
lineage3 | 2 |
lineage4.4.1.1.1 | 2 |
lineage3.1.1 | 1 |
lineage3.1;lineage9 | 1 |
lineage4.3.1 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR9971080 | RR-TB | lineage2.2.1 | None |
ERR978726_ERR978727 | RR-TB | lineage4.8 | None |
ERR4769530 | RR-TB | lineage4.9 | None |
ERR867570 | RR-TB | lineage4.9 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None |
ERR978755 | RR-TB | lineage4.8 | None |
ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None |
ERR4829816 | RR-TB | lineage4.4.1.1 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
SRR5007169 | RR-TB | lineage4.8.2 | None |
ERR987707 | MDR-TB | lineage4.7 | None |
ERR4769508 | RR-TB | lineage4.9 | None |
SAMEA3501065 | RR-TB | lineage4.8 | None |
ERR4769433 | RR-TB | lineage4.9 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
SRR11342653 | MDR-TB | lineage2.2.1 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
ERR126597 | HR-TB | lineage4.4.1.2 | None |
SAMEA3501070 | RR-TB | lineage4.8 | None |
SAMEA3501046 | RR-TB | lineage4.8 | None |
SRR1735598 | RR-TB | lineage4.9 | None |
SAMEA3501067 | RR-TB | lineage4.8 | None |
ERR978734 | RR-TB | lineage4.8 | None |
ERR2027209 | MDR-TB | lineage1.2.1.1 | None |
SRR11342658 | RR-TB | lineage4.1.2 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
SRR19303820 | RR-TB | lineage4.8 | None |
SRR5007167 | RR-TB | lineage4.1.1.3.1 | None |
SRR1735596 | RR-TB | lineage4.9 | None |
ERR2513830 | RR-TB | lineage4.8 | None |
SRR15316595 | RR-TB | lineage4.4.2 | None |
ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
ERR4819706 | MDR-TB | lineage4.3.4.2 | None |
SRR18003047 | MDR-TB | lineage2.2.1 | None |
ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
SRR5818586 | RR-TB | lineage4.2.2.2 | None |
ERR4819528 | RR-TB | lineage3 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
ERR4820410 | RR-TB | lineage3.1.1 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
SRR11342655 | MDR-TB | lineage2.2.1 | None |
SAMEA3501052 | RR-TB | lineage4.8 | None |
ERR978757 | RR-TB | lineage4.8 | None |
ERR5917985 | MDR-TB | lineage2.2.1 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
SRR18002947 | MDR-TB | lineage2.2.1 | None |
SAMEA3501063 | RR-TB | lineage4.8 | None |
SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
ERR978761 | Other | lineage4.8 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
ERR4818259 | RR-TB | lineage4.1.1.1 | None |
ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None |
ERR867567 | RR-TB | lineage3 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
ERR978760 | RR-TB | lineage4.8 | None |
ERR9896153 | RR-TB | lineage4.4.1.1 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
SRR5007193 | RR-TB | lineage4.1.1.3.1 | None |
ERR4829039 | RR-TB | lineage4.3.1 | None |
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |