Rv3596c - c.2169C>T
Drug resistance types
20 Sensitive
4 RR-TB
81 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage4.9 | 28 |
| lineage2.2.1 | 14 |
| lineage4 | 11 |
| 63 | |
| lineage3 | 2 |
| lineage4.1.2.1 | 11 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.8 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6 | 1 |
| lineage2.2.2 | 2 |
| lineage2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage9;lineage3.1 | 1 |
| La1.7.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 168 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR4035714 | Other | lineage4.1.2 | None | ERR4818840 | Sensitive | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2509673 | Other | lineage2.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | ERR1023509 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341315 | Sensitive | None | SRR6045952 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | ERR2693239 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046397 | Other | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | ERR4798098 | Sensitive | lineage3 | in | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR1034652 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283047 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR2884650 | Sensitive | lineage4.8 | es | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4798406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9119669 | HR-TB | None | ERR9787371 | Sensitive | lineage6 | None | ERR9121348 | Sensitive | lineage4.8 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR13837684 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861235 | HR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4813861 | Other | lineage4.3.3 | None | ERR158583 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675558 | HR-TB | None | SRR3675502 | Other | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675571 | HR-TB | None | ERR212123 | Other | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None |
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