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SRA data
Rv0668
- c.1833C>G
Drug resistance types
2 Sensitive
0 RR-TB
8 HR-TB
5 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9;lineage6.3
2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
2
lineage4.9
1
La1.7;lineage4.9
1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
1
La2;M.canetti
1
M.canetti
1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
18
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR176560
HR-TB
La1.7;lineage4.9
None
ERR234659
Other
None
ERR266120
Sensitive
M.canetti
None
ERR266126
Sensitive
La2;M.canetti
None
ERR3797014
Other
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3797017
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR4798406
MDR-TB
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
None
ERR4811022
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4811493
HR-TB
lineage4.9
None
Showing 1 to 10 of 18 entries
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