Rv0682 - c.207C>T
Drug resistance types
136 Sensitive
34 RR-TB
81 HR-TB
23 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1 |
| 63 | |
| lineage4.1.1.3 | 1 |
| lineage3 | 12 |
| lineage4.1.2.1 | 10 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage2.2.1 | 17 |
| lineage4.8 | 9 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage4 | 85 |
| lineage4.9 | 103 |
| lineage2.2.1.1 | 5 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 5 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3.1.2 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage1.2.1.1 | 1 |
| lineage5 | 2 |
| lineage4.1.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage1.1.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage5.1.4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.7 | 3 |
| La2 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 376 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9634265 | Sensitive | None | ERR987722 | HR-TB | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140736 | RR-TB | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR16157123 | Other | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814312 | Other | lineage4 | None | SRR3675488 | HR-TB | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675222 | Other | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR3275450 | Other | lineage4 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675501 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675265 | Other | lineage4 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675387 | Sensitive | None | ERR4815910 | Other | lineage4.1.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR3675522 | Other | None | ERR4815909 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816183 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816738 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816756 | RR-TB | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818017 | Sensitive | lineage4.9 | None | ERR4819017 | RR-TB | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4819051 | Other | lineage4 | None | ERR4818355 | Other | lineage3 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4819192 | Other | lineage3 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4820324 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820746 | RR-TB | lineage3 | None | SRR5341456 | Other | None | ERR1023509 | Other | None | ERR2446382 | Other | lineage4 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820833 | HR-TB | None | SRR5341330 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045519 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821310 | Other | lineage5 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045033 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6046250 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046492 | Other | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4830353 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046802 | Other | lineage4 | None | ERR4831638 | Sensitive | None | ERR4831117 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7646029 | HR-TB | lineage4.2.1.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323053 | HR-TB | None | SRR7755703 | HR-TB | lineage4.2.1.1 | None | ERR323039 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4796577 | MDR-TB | None | ERR4797313 | HR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | None | ERR4798431 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6197022 | Other | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None |
|---|
