Rv0635 - c.-219T>C


Drug resistance types
1 Sensitive 5 RR-TB 48 HR-TB 23 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 7
La1.2.BCG;La1.8.1 1
lineage4.9 27
M.canetti;lineage4.9;lineage9 1
lineage2.2.1 5
lineage1.1.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage2.1;lineage4.9 9
lineage2.2.1;lineage3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.1;lineage4.3.2;lineage4.9 1
13
lineage2.1;lineage4.9;lineage6.3 10
La2;lineage4.9;lineage9 1
lineage4.1.3 2
La1;lineage4.9 1
lineage3 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage2.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 2
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.2.2 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage6.1.3 1
lineage3.1;lineage9 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
La3;lineage2 1
La3;lineage2.1;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage1.1.2 1
M.canetti;lineage4.9 3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.9;lineage9 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage4.1.1.3 1
lineage4.8.1 1
lineage2.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.2 1
lineage4.6.3;lineage4.9 2
La3;lineage4.9 3
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 173
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675275 Other lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6045219 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR3675236 Other None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR23961542 Other La1;lineage4.9 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR29050859 Other lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR5818672 Other lineage1.2.2.2 None
SRR6045555 Other lineage4.9 None
ERR9786604 Other None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675572 Other None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6785413 Other lineage2.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1172310 HR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None
SRR20969677 HR-TB La3;lineage2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR8665994 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR11465025 Other lineage4.1.1.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR26399265 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR23961549 Other La1.2 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR2514692 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR1180226 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR29016901 Other La3;lineage4.9 None
SRR6789626 Other None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR9117709 Other None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR3283018 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR25827682 Other None
SRR6789621 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None