Rv0667 - c.2274G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
52 Sensitive
29 RR-TB
16 HR-TB
11 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 6 |
| lineage4.8 | 8 |
| lineage4.9 | 56 |
| lineage4.4.1.1.1 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage2.2.1 | 14 |
| lineage4.3.4.2.1 | 2 |
| La1.2 | 1 |
| La1.3 | 2 |
| lineage4.3.3 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4 | 2 |
| lineage1.2.2.2 | 1 |
| La1.6 | 2 |
| lineage6 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.1.2.1;lineage4.9 | 1 |
| 1 | |
| lineage3.1;lineage9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.6.5 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| La2 | 1 |
| La1.4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7070223 | HR-TB | lineage3 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769436 | Other | La1.3 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821334 | Other | lineage4.1.3 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4821773 | Other | La1.6 | None | ERR9787033 | Sensitive | lineage6 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR2229234 | Sensitive | lineage4.8 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None |
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