Rv0667 - c.2646G>C
Drug resistance types
48 Sensitive
19 RR-TB
83 HR-TB
28 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 4 |
| lineage2.2 | 5 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 144 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.2.1 | 2 |
| La1.7;lineage4.9 | 5 |
| lineage4.1.2.1 | 3 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;lineage4.9 | 14 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1 | 20 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage3 | 2 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| 3 | |
| lineage4.3.4 | 1 |
| La1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| La2;lineage2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2;lineage4 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage5.1.4 | 1 |
| La3;lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1;lineage9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.7.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.8.1 | 2 |
| lineage1;lineage4.9 | 2 |
| lineage4.1.1.3 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 2 |
| lineage3.1.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| La2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 286 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3273109 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR4812155 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR473332 | Other | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR212001 | HR-TB | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR23961549 | Other | La1.2 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR363453 | Other | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4769442 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR9786843 | Other | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR176651 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR1063896 | HR-TB | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR5341330 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046878 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR926165 | Other | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None |
|---|
