lineage | Count |
---|---|
lineage4.9 | 53 |
lineage4 | 17 |
lineage2.2.1 | 6 |
21 | |
lineage4.1.2.1 | 1 |
lineage2.2 | 5 |
La2 | 1 |
lineage6.1.1 | 2 |
lineage3 | 4 |
lineage3.1.2 | 1 |
lineage4.5 | 4 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.8 | 1 |
lineage4.6.1.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.2.1 | 1 |
lineage2.2.2 | 1 |
lineage5.1.4 | 1 |
spoligotype | Count |
---|---|
None | 127 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819933 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341470 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045263 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2843529 | Sensitive | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4828560 | Sensitive | lineage2.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR323053 | HR-TB | None | ERR4831724 | HR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | ERR323039 | HR-TB | None | ERR3283021 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6359069 | Other | lineage4.9 | None | ERR4812155 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR6866410 | Sensitive | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1140736 | RR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1172310 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26937004 | MDR-TB | lineage4.5 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR4816964 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR176740 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR4817104 | Sensitive | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5073609 | HR-TB | lineage4.5 | vn | SRR5067267 | HR-TB | lineage4.5 | vn | ERR2229315 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | DRR185108 | Sensitive | lineage2.2.2 | vn | ERR2513283 | Other | lineage5.1.4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None |
---|