Rv0529 - c.477T>C


Drug resistance types
45 Sensitive 3 RR-TB 167 HR-TB 28 MDR-TB 12 Pre-XDR-TB 0 XDR-TB 120 Other
lineage Counts
lineage Count
174
lineage4.6.1.1 1
lineage4 41
lineage4.3.4 2
lineage4.1.2.1 14
lineage4.1.2.1.1 1
lineage2.2 8
lineage4.3.4.2.1 2
lineage4.3.2 2
lineage4.3.3 5
lineage4.6.2.2 3
lineage2.2.1 20
lineage1.1.3.1 1
lineage1.1.2 2
lineage5.2 2
lineage4.8;lineage4.1 1
lineage4.1.3 2
lineage6.3.1 1
lineage2.2.2 1
lineage2 4
lineage4.4.1.1 3
lineage4.9 32
lineage3.1 4
lineage4.5 2
lineage1.2.1.2.1 1
La1.8.1 3
lineage2.1 3
La1.7.1 1
lineage4.9;lineage4.6.3 1
lineage2.2.1;La3 1
lineage9;lineage3.1 1
lineage4.9;La3 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.1.1 1
lineage6.3;lineage2.2.1 1
lineage4.1 1
lineage3;lineage2.2.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3;lineage2.1 1
lineage1.2.1.1 1
lineage4.8 2
lineage4.3.2.1 2
lineage4.8;La3 1
lineage4;lineage1.1.2 1
lineage4.1.1.2 1
lineage4.2.2.2 1
lineage4.7 2
lineage4;lineage1.1 1
lineage3 3
lineage4.9;lineage2.1 1
lineage2.2.1.1 2
lineage1.1 1
lineage4.2.1 1
La2 1
lineage4.6.2.2;lineage4.1.3 1
lineage4.1.2 2
La1 2
lineage1.2.2.2 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 375
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6358837 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR6358979 Other None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR6866639 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR702404 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736839 Other None
ERR736835 HR-TB None
ERR736856 HR-TB lineage4 None
ERR9786694 Other lineage4.1.2.1 None
ERR751326 Sensitive lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR9119096 Other lineage4.3.3 None
ERR9119669 HR-TB None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR736874 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR7801186 Sensitive lineage2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786671 Other None
ERR987722 HR-TB None
ERR9786843 Other None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR1172310 HR-TB None
SRR069981 HR-TB lineage2.2.2 None
SRR10808805 Sensitive None
SRR1158918 Sensitive lineage4 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR069989 HR-TB lineage2 None
SRR10809074 Sensitive lineage4 None
SRR1169194 Other None
SRR1172857 MDR-TB None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172951 Other None
SRR1173562 HR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173484 Other lineage4 None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173706 Other lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173788 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173778 Other None
SRR1174897 HR-TB None
SRR1175049 RR-TB None
SRR1184294 HR-TB None
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1181020 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183965 Sensitive lineage4.9 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1196494 MDR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR13423649 Sensitive lineage2.2.1 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13423544 Other lineage4.5 None
SRR13837498 Sensitive lineage4.9 None
SRR13837630 Sensitive lineage4.9 None
SRR13837591 HR-TB lineage4.9 None
SRR20969677 HR-TB lineage2 None
SRR13861261 Sensitive lineage4.9 None
SRR13861428 Other lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR1791696 Other La1.8.1 None
SRR19295647 Sensitive lineage4.9 None
SRR19304036 HR-TB None
SRR13861151 RR-TB lineage4.9 None
SRR15368973 Other None
SRR1640750 HR-TB None
SRR1710057 Other lineage2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR25827682 Other None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
ERR176793 Other lineage4.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815604 HR-TB None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR176779 HR-TB None
SRR3675465 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675482 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161033 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
ERR181744 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675280 HR-TB lineage4.9 None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
ERR702405 Sensitive lineage2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675234 Other None
SRR3675574 HR-TB None
SRR3675311 Other None
ERR181887 HR-TB None
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675383 HR-TB None
ERR4815752 Other lineage4.9 None
SRR3675456 HR-TB None
ERR176751 HR-TB None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
ERR4817037 Other lineage4.9 None
SRR3675555 HR-TB None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
ERR212123 Other None
ERR212125 HR-TB lineage4 None
ERR176740 HR-TB None
SRR3675503 Sensitive lineage4.9 None
SRR3675510 Other None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
SRR3675572 Other None
ERR212121 HR-TB None
SRR4033618 Sensitive lineage4.3.2.1 None
ERR212138 HR-TB lineage4 None
ERR4816466 HR-TB None
ERR4818021 Other La1.8.1 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
SRR5341387 Other lineage4 None
ERR3275196 Other lineage2.2.1 nl
ERR234659 HR-TB None
ERR2509673 Other lineage2.2.1 None
ERR4818615 Other None
ERR4818252 Other lineage4.1.1.2 None
ERR2513470 Other lineage4.2.2.2 None
ERR4818929 HR-TB None
ERR4819932 Other lineage4.7 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
SRR5341302 HR-TB None
SRR5341455 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341333 HR-TB None
SRR5341461 Sensitive lineage4 None
ERR2693231 Other None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2446563 Other lineage2.2.1 nl
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR5341467 Other lineage4 None
SRR5341469 Other lineage4 None
ERR2693257 Other None
ERR2693254 Other None
SRR5341470 HR-TB None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693230 Other None
SRR6045503 HR-TB None
SRR6045519 HR-TB None
SRR6045526 HR-TB None
ERR278594 HR-TB None
SRR6045555 HR-TB None
SRR6045892 Sensitive None
SRR6046133 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6045233 HR-TB None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6046015 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
SRR6325442 HR-TB None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6511621 HR-TB None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR11465597 Sensitive lineage4.1.2.1 None
SRR6789626 Other None
ERR294248 HR-TB None
SRR6785263 Sensitive lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
ERR5311081 HR-TB None
ERR323036 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR5311099 HR-TB None
SRR6982077 MDR-TB lineage4.3.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR5311090 HR-TB None
SRR7496509 Other None
ERR323038 HR-TB None
SRR8217918 HR-TB None
SRR7496523 Other lineage4.7 None
ERR323053 HR-TB None
SRR998801 MDR-TB lineage4.6.2.2;lineage4.1.3 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7535086 Other None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323045 HR-TB None
ERR323055 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
ERR323054 HR-TB lineage3.1 None
ERR323085 Sensitive lineage4 None
ERR323063 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323108 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR323107 Other lineage4 None
ERR1035157 Other lineage4.9 None
ERR1035122 Sensitive None
ERR11049020 Other lineage4.8 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283008 Other lineage4.9 None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283025 HR-TB None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283032 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3283036 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283051 Other lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3445501 HR-TB None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797014 Other None
ERR3797017 Other None
ERR3797016 HR-TB None
ERR3797024 Other lineage4.9 None
ERR3797036 HR-TB None
ERR3797043 HR-TB None
ERR3797044 Other None
ERR3797061 Other None
ERR3797058 Other lineage4.9 None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4407463 HR-TB None
ERR387051 HR-TB None
ERR4188247 HR-TB None
ERR4188350 HR-TB None
ERR5336148 Other None
ERR473332 Other lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797184 Sensitive lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4797588 MDR-TB lineage3 None
ERR4798099 Other None
ERR4798262 HR-TB La1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR4810624 HR-TB lineage2.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR4811142 MDR-TB None
ERR5917710 Other lineage4.1.2.1 None