Rv0486 - c.531A>G
Drug resistance types
49 Sensitive
0 RR-TB
157 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 8 |
| 141 | |
| lineage4.6.1.1 | 1 |
| lineage4.9 | 39 |
| lineage4 | 32 |
| lineage4.3.4 | 2 |
| lineage5.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1 | 12 |
| lineage4.6.2.2 | 1 |
| lineage6 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 14 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage3.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3 | 2 |
| lineage9;lineage3.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 2 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1 | 1 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 293 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6359045 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736867 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9634265 | Sensitive | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9787197 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR10808805 | Sensitive | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1173153 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1184388 | Other | None | SRR1196768 | MDR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1640750 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR12544110 | Sensitive | lineage2.2.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675234 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675510 | Other | None | SRR3675456 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816656 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR2514692 | Other | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR2693231 | Other | None | ERR2693254 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045399 | Other | None | ERR2693227 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325444 | HR-TB | None | ERR4830353 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR294248 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR5311090 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR4188350 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798431 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None |
|---|
