Rv0006 - c.342C>T
Drug resistance types
4 Sensitive
1 RR-TB
8 HR-TB
6 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1;lineage9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 3 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.9 | 4 |
| lineage6.1.1 | 2 |
| lineage4.9 | 3 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 1 |
| 1 | |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 24 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR6650355 | Sensitive | lineage1.2.2.2 | None | SRR7496529 | Sensitive | lineage3 | us | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR29273669 | MDR-TB | lineage4.1.2.1 | None | ERR987722 | MDR-TB | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
|---|
