TB-Profiler
Home
Upload
SRA data
Rv3793
- c.1809T>G
Drug resistance types
9 Sensitive
3 RR-TB
53 HR-TB
27 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
31 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
27
M.canetti;lineage2.1;lineage4.9
14
La3;M.canetti;lineage2.1;lineage4.9
9
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
M.canetti;lineage2.1;lineage4.9;lineage6.3
4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
4
lineage2.2
2
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
2
Showing 1 to 10 of 61 entries
Previous
1
2
3
4
5
6
7
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
125
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063862
HR-TB
lineage4.9
None
ERR1063896
Sensitive
None
ERR11466044
Other
lineage4.1.1.3
None
ERR124636
Sensitive
lineage4.9
None
Showing 1 to 10 of 125 entries
Previous
1
2
3
4
5
…
13
Next