lineage | Count |
---|---|
La3 | 1 |
lineage4 | 4 |
54 | |
lineage4.9 | 4 |
lineage4.1.1.3 | 2 |
lineage2.2.1 | 9 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage2.2 | 4 |
lineage9;lineage3.1 | 1 |
lineage4.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2.1 | 7 |
lineage4.8 | 2 |
lineage4.1.2 | 1 |
lineage3 | 4 |
lineage1.1.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.7 | 1 |
lineage1.2.2.2 | 1 |
lineage6.1.1 | 2 |
lineage4.6.2.2 | 2 |
lineage2 | 1 |
lineage4.1.3 | 2 |
La1 | 1 |
lineage3.1.2 | 1 |
La1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage6.2.3 | 1 |
spoligotype | Count |
---|---|
None | 112 |
ID | Drug resistance | Lineage | Country iso2 | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR12416824 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR176568 | Other | lineage4.3 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR158583 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675502 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675550 | Other | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675572 | Other | None | ERR212033 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR234659 | HR-TB | None | ERR2693257 | Other | None | SRR5149238 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341418 | Other | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341333 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2660479 | Sensitive | lineage1.1.2 | None | SRR6046133 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046225 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046397 | Other | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046644 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6485169 | Sensitive | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6785451 | MDR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR1034652 | Other | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3797069 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798406 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | ERR6358991 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6198317 | Other | La1.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None |
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