Rv0006 - c.1122G>C


Drug resistance types
8 Sensitive 12 RR-TB 86 HR-TB 44 MDR-TB 2 Pre-XDR-TB 3 XDR-TB 104 Other
lineage Counts
lineage Count
lineage4.9 40
La1.6;La3;lineage4.9 1
lineage2.1;lineage4.9 12
lineage4.3.4.2.1 2
La1;lineage2;lineage4.9 1
lineage4.1.2.1 10
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.1 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage5.2 2
16
lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9 24
La1.7;lineage4.9 5
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.8.1 3
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.1 1
lineage4.4.1.1 2
La3;lineage4.9 5
La1;lineage4.9 2
lineage4.1.1;lineage4.9 1
lineage2.2.2 1
lineage2.1;lineage4.9;lineage6.3 7
lineage2.2.1 11
lineage4.3.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 5
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.2 3
M.canetti;lineage4.9 3
La3;M.canetti;lineage4.8;lineage4.9 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3.1;lineage9 1
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 3
lineage4.6.1 1
lineage3 1
lineage2.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage1.1.2;lineage4 1
La1.7.1 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage1.1 1
lineage4.1.3 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.8 1
lineage6.3.1 1
lineage4.5 1
lineage1.2.1.2.1 1
lineage6 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.2 1
La3;M.canetti;lineage3.1 1
lineage4.7 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage4.9 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2.1;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 259
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10809074 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR12006550 Sensitive None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1791696 Other La1.8.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR176643 Other La3;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR069989 HR-TB lineage2.2.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6831950 Sensitive lineage4.3.3 None
ERR3797046 HR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4813861 Other lineage4.3.3 None
ERR3283018 HR-TB lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
ERR234659 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1169306 Other La3;lineage4.9 None
ERR4800341 Other None
ERR4816999 Other None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358755 Other lineage4.6.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4797588 MDR-TB lineage3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other None
ERR4817896 HR-TB lineage2.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
ERR4819877 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR7535086 Other None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR4816585 Other lineage2.2.1 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR7240492 HR-TB La1.7.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR3797070 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
ERR212001 HR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786604 Other None
SRR3675243 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1167384 Other La3;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR161034 Other lineage4.3.4.2.1 None
ERR3077978 Other lineage1.1 None
SRR6046133 HR-TB lineage4.9 None
ERR4797201 Other None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787139 Other lineage6.3.1 None
SRR13423544 Other lineage4.5 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR1792478 HR-TB La1.7.1 None
ERR9787165 Other lineage6 None
ERR4816466 HR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7240033 Other La1.8.1 None
SRR3675494 RR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR23961549 Other La1.2 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR212033 Other lineage4.9 None
ERR9787197 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675457 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR18213713 HR-TB None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1169249 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None