Rv3795 - c.1542G>C
Drug resistance types
13 Sensitive
2 RR-TB
119 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| 130 | |
| La2 | 1 |
| lineage3.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4 | 10 |
| lineage4.9 | 20 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage2.2 | 6 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1 | 10 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1.2 | 1 |
| lineage3 | 4 |
| lineage9;lineage3.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 217 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR294266 | HR-TB | None | ERR294248 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067681 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1034652 | Other | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3283024 | Other | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR133986 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR4024991 | Other | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR387051 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4798099 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6358837 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | None | ERR736835 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR8976043 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1169306 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13837499 | Sensitive | lineage4.9 | None | SRR13837677 | Sensitive | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861660 | Sensitive | lineage4.9 | None | SRR13861596 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR14782405 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR17658565 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR1035239 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR6325445 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR158583 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675482 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675270 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675510 | Other | None | SRR3675383 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR4816151 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR1035162 | Other | None | ERR3275220 | Other | lineage3 | nl | ERR2514692 | Other | None | ERR4818929 | HR-TB | None | SRR5341453 | Sensitive | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | ERR1023509 | Other | None | ERR2693231 | Other | None | ERR2693232 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR2446144 | Other | lineage3 | nl | SRR6045555 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6044918 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR2517528 | Other | lineage3 | nl | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | ERR278594 | HR-TB | None | SRR6046492 | Other | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None |
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