Rv0668 - c.3024C>G


Drug resistance types
9 Sensitive 21 RR-TB 88 HR-TB 51 MDR-TB 8 Pre-XDR-TB 3 XDR-TB 85 Other
lineage Counts
lineage Count
lineage4.6.3;lineage4.9 1
lineage2.2.1 14
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;lineage4.9;lineage7 3
lineage4.9 66
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.3.2.1 3
lineage4.6.1.1 1
lineage4.9;lineage9 2
lineage3 6
La1.6;La3;lineage4.9 2
La1.7;M.canetti;lineage4.9 5
lineage6.1.1 2
lineage4.3.4.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4.9;lineage6.3 4
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.3 3
La1.7;lineage4.9 12
M.canetti;lineage2.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2 1
La1.7 2
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.2 2
M.canetti;lineage4.9;lineage9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
7
La1;lineage4.9 1
lineage4.1.2.1 2
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 5
La3;M.canetti;lineage2.2.1 1
lineage2.2.1;lineage3;lineage4 1
lineage4.1.1.3 2
lineage2.2.1.1 1
La2;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
M.canetti;lineage4.9 6
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage3.1.1 1
La1.7.1;lineage4.9 1
lineage4.6.2.2 3
La3 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1;lineage4.1.2.1 1
lineage2.1 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.4.1.2 1
M.canetti;lineage4.2 1
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage3.1;lineage9 1
lineage1.1.2 2
La3;lineage2.1;lineage6.3 1
La1.2.BCG 1
lineage2.2 1
lineage4.3.4 1
lineage4.9;lineage7 3
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1;lineage6.3 1
lineage1;lineage4.9 1
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage1.2.2.2 1
lineage4.3.2;lineage4.9 1
La3;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage1.2.2.1;lineage4.4.1.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7;lineage4.3.4.1 1
La1.4 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.2;lineage4.9 2
lineage4.8 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7.1 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 265
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR6832787 Other lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR3675312 Sensitive lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR1173778 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR17832802 HR-TB lineage3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR1173118 Other lineage2.2.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4816656 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675222 Other La1.7 None
SRR10808730 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736856 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1175074 Other None
SRR1184372 MDR-TB None
SRR28119805 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR4819051 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
ERR11465025 Other lineage4.1.1.3 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4820773 HR-TB lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR6046133 HR-TB lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6045219 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
SRR1172728 RR-TB La3 None
ERR4830353 HR-TB La1.7 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR14066533 RR-TB lineage1.1.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4797588 MDR-TB lineage3 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6046485 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1196768 MDR-TB None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR245675 Sensitive lineage1.1.2 None
ERR6866807 RR-TB lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR502908 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4769493 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR3283044 Other lineage4 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283032 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063849 HR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4815441 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR108471 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1183111 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR1196546 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR5311094 HR-TB lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1172817 Other La3 None
SRR16278274 Other La1.4 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283018 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
SRR1172857 Other None
SRR1196583 Other lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786076 Other lineage3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1173633 Other lineage4.9 None