lineage | Count |
---|---|
63 | |
lineage4.9 | 8 |
lineage4.1 | 1 |
lineage4 | 7 |
lineage2.2 | 5 |
lineage2.2.1 | 3 |
lineage4.2.1.1 | 1 |
La1.2 | 1 |
lineage2.2.1.2 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.7 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 93 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675501 | HR-TB | None | ERR212123 | Other | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | ERR4819051 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341330 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | ERR2693231 | Other | None | SRR6045519 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046644 | HR-TB | None | SRR6046397 | Other | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR1023525 | HR-TB | lineage4 | None | ERR502889 | Other | None | ERR067681 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR3283055 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3439432 | Other | None | ERR3797015 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR4811493 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798406 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | None | SRR1172310 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR158583 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR11082634 | Sensitive | lineage4.7 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675488 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR3675222 | Other | None |
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