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SRA data
Rv0565c
- c.1113T>C
Drug resistance types
2 Sensitive
1 RR-TB
34 HR-TB
6 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
55 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
14
8
lineage4.9;lineage6.3
6
lineage2.1;lineage4.9;lineage6.3
5
La1.7;M.canetti;lineage4.9
4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
La1.7;lineage4.9
4
M.canetti;lineage4.9
3
M.canetti;lineage2.2.2;lineage6.2
2
La3;lineage2.1;lineage4.9;lineage6.3
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
101
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR176560
HR-TB
La1.7;lineage4.9
None
ERR176751
Other
lineage4.9
None
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