Rv2477c - c.252C>G
Drug resistance types
4 Sensitive
4 RR-TB
21 HR-TB
10 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 7 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 23 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage4.9 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| La1.7 | 1 |
| lineage1.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR8380944 | Sensitive | lineage1.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR161037 | HR-TB | lineage4.9 | None |
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