Rv0407 - c.822G>C
Drug resistance types
12 Sensitive
5 RR-TB
9 HR-TB
9 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 2 |
| lineage4.9 | 16 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| 1 | |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.3.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| SRR5341384 | HR-TB | lineage4.9 | None |
| SRR5341330 | Other | lineage4.9 | None |
| SRR14801749 | HR-TB | lineage4.9 | None |
| SRR3675461 | RR-TB | lineage4.9 | None |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| SRR6511621 | Sensitive | lineage4.9 | None |
| SRR3675441 | Other | lineage4.9 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR28119827 | Other | La3;lineage4.9 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR3283055 | HR-TB | lineage4.9 | None |
| ERR323062 | Sensitive | lineage4.9 | None |
| SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
| ERR1063896 | Sensitive | None | |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| ERR4818252 | Sensitive | lineage4.1.1.2 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR8479578 | Sensitive | lineage1.1.3.1 | None |
| ERR4797193 | HR-TB | lineage1.1.2 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| ERR1034799 | HR-TB | lineage4.3.3 | pe |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR323066 | Sensitive | lineage4.9 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR6832178 | HR-TB | lineage4.2.1.1 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR9970979 | Sensitive | lineage4.8 | None |
