Rv1484 - c.468G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
15 Sensitive
1 RR-TB
28 HR-TB
9 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 28 |
| lineage2.2.1 | 6 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| 2 | |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage2.2 | 1 |
| La1.7;lineage4.9 | 2 |
| La2;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage9 | 3 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage3 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR161037 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR26159035 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR29096683 | Sensitive | lineage1.1.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR2514692 | Other | None | ERR987722 | MDR-TB | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR6866807 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046485 | Other | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR29096717 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR29097037 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None |
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