Rv2681 - c.-461T>C
Drug resistance types
4 Sensitive
1 RR-TB
12 HR-TB
2 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.2;lineage4 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 4 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage1.1.2 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR13292374 | Sensitive | lineage1.1.2 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4457784 | Sensitive | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18911915 | Sensitive | lineage1.1.2 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4024975 | Sensitive | lineage4 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
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