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SRA data
Rv1173
- c.1068T>C
Drug resistance types
2 Sensitive
2 RR-TB
21 HR-TB
7 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
32 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
16
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
La1.7;lineage4.9
4
M.canetti;lineage4.9
4
La1.7;M.canetti;lineage4.9
2
La1.6;La3;lineage4.9
2
La1;lineage2;lineage4.9
1
La1.7.1;La1.7.X-unk4;lineage7
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
65
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR133825
HR-TB
La1;lineage4.9
None
ERR161037
Other
lineage4.9
None
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