Rv1173 - c.2040G>C


Drug resistance types
7 Sensitive 3 RR-TB 23 HR-TB 7 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 31 Other
lineage Counts
lineage Count
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage6.1.3 1
lineage2.2.1.1 3
lineage2.2.1 4
M.canetti;lineage4.9 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.2;lineage4.9 3
lineage4.6.3;lineage4.9 1
lineage1.1.1 1
La1.7;lineage4.9 3
1
La1.7;M.canetti;lineage4.9 4
lineage4.1;lineage4.8 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage4.9 7
lineage4.6.2.2 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.5 1
lineage4.9;lineage7 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage3.1;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.X-unk4;lineage4.9 1
La1.7.1 1
lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.4.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 72
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9787153 Other lineage6.1.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR3675385 Other La1.7;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR8217918 HR-TB lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR752233 HR-TB lineage4.5 th
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161037 Other lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180172 Other lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR3283042 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None