Rv1908c - c.480A>C
Drug resistance types
3 Sensitive
5 RR-TB
151 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| 146 | |
| lineage2 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9 | 22 |
| lineage4.5 | 2 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 7 |
| lineage3;lineage2.1 | 1 |
| lineage4 | 15 |
| lineage4.3 | 1 |
| lineage4.8 | 3 |
| lineage4;lineage1.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.3.3 | 1 |
| lineage4.1.2.1 | 10 |
| lineage3 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.2 | 2 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 235 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675465 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR25827682 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675383 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675550 | Other | None | ERR212123 | Other | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816585 | Other | lineage2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR1035162 | Other | None | SRR5341302 | HR-TB | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2693257 | Other | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046151 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045952 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR502532 | HR-TB | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067681 | HR-TB | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR4769474 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1173363 | HR-TB | None | SRR1173629 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173400 | Other | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1183049 | Other | lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14801749 | Sensitive | None | SRR13423544 | Other | lineage4.5 | None | SRR13861629 | RR-TB | lineage4.9 | None |
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