lineage | Count |
---|---|
17 | |
lineage4.1.2.1 | 1 |
lineage2.2.1 | 8 |
lineage4.4.1.1 | 1 |
lineage2.2.1.1 | 6 |
lineage9;lineage3.1 | 1 |
lineage1.2.1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.9;La1 | 1 |
La1.2 | 1 |
lineage4.9 | 2 |
lineage2.1 | 1 |
lineage2.2 | 3 |
La1 | 1 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | ERR987722 | HR-TB | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1172310 | HR-TB | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR2101443 | HR-TB | lineage2.2.1 | None | ERR8025719 | Pre-XDR-TB | lineage2.2.2 | None | SRR2101716 | Sensitive | lineage2.2.1.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961549 | Other | La1.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176740 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | SRR6044838 | Other | lineage4.9 | None | ERR4821572 | Other | lineage2.1 | None | ERR294266 | HR-TB | None | SRR6045399 | Other | None | SRR6046460 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6982365 | Other | lineage2.2.1 | None | SRR6982001 | Sensitive | lineage2.2.1.1 | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR6358991 | HR-TB | None | ERR323039 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR323053 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR5864540 | Pre-XDR-TB | lineage2.2.1 | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7821163 | Other | lineage2.2.1 | None |
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