Rv0565c - c.1023T>C


Drug resistance types
0 Sensitive 1 RR-TB 26 HR-TB 14 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 23 Other
lineage Counts
lineage Count
lineage4.9 8
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4.9 4
lineage3.1.2.1;lineage4 1
La1.7;lineage4.9 5
lineage4.3.4.2.1 1
La3;lineage1.1.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1.2.1 2
La1.7;M.canetti;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 1
2
lineage3.1;lineage9 1
lineage4.1.1.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;lineage4.9 2
lineage4.6.2.2 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
lineage4.2;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.2.BCG 1
La3;lineage2.1;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 65
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283018 HR-TB lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR11252612 Other La3;lineage4.9 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
SRR3675385 Other La1.7;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675492 Other La1.7;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR6046485 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9786843 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6046133 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR11662690 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11252736 Other lineage4.9 None
ERR212001 HR-TB None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None