Rv0001 - c.1164A>G


Drug resistance types
1 Sensitive 3 RR-TB 5 HR-TB 7 MDR-TB 1 Pre-XDR-TB 3 XDR-TB 10 Other
lineage Counts
lineage Count
La1.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
lineage4.5 1
lineage4.2;lineage4.9 3
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.2 1
lineage2.2.1 2
lineage3.1;lineage9 1
La1.7.X-unk4;lineage4.9 1
La1.7;lineage4.9;lineage7 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.6.3;lineage4.9 1
1
lineage4.3.4.2.1 1
La1;lineage4.9 1
lineage3.1.2.2 1
lineage4.1.1.3 1
M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 30
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR23961549 Other La1.2 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR11081997 Sensitive lineage4.5 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR11252664 Other lineage2.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR23961542 Other La1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None