Rv0001 - c.1164A>G
Drug resistance types
1 Sensitive
3 RR-TB
5 HR-TB
7 MDR-TB
1 Pre-XDR-TB
3 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.X-unk4;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage2.2 | 2 |
| La1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| 1 | |
| lineage4.2;lineage4.9 | 3 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 30 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR23961549 | Other | La1.2 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR23961542 | Other | La1;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR9786843 | Other | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11081997 | Sensitive | lineage4.5 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
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