EBG00000313339 - n.771C>T


Drug resistance types
92 Sensitive 10 RR-TB 9 HR-TB 52 MDR-TB 14 Pre-XDR-TB 4 XDR-TB 16 Other
lineage Counts
lineage Count
lineage1.2.1.2 21
lineage4.2.1.1 4
lineage2.2.1 50
lineage4.3.4.2.1 12
La1.7.1 2
lineage1.1.2 10
La1.7;lineage4.9 2
lineage4.3.3 20
lineage1.2.1.2.1 5
lineage4.8 10
lineage4.1.1.1 2
lineage4.3.4.2 2
lineage3 3
lineage2.2.2 8
lineage4.9 4
lineage3.1.1 14
lineage4.9.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.1.2 4
lineage3.1;lineage9 1
lineage4.6.5 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 1
lineage1.2.2.2 1
lineage4.3.3;lineage4.8 1
lineage1.2.2.1;lineage4.4.1.1 2
lineage4.1.2.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.2.1 3
lineage1.1.3.2 1
lineage4.2.1;lineage4.3.3 1
La1.2.BCG 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 197
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12882429 Sensitive lineage1.2.1.2 None
ERR12544262 RR-TB lineage4.2.1.1 None
ERR11243555 MDR-TB lineage2.2.1 None
ERR7801302 Sensitive lineage4.3.4.2.1 None
ERR6362460 MDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR12882673 Sensitive lineage1.1.2 None
ERR9119764 RR-TB lineage2.2.1 None
SRR3675492 Other La1.7;lineage4.9 None
ERR10877888 MDR-TB lineage4.3.3 None
ERR6336732 Sensitive lineage1.2.1.2.1 None
ERR11243552 MDR-TB lineage2.2.1 None
ERR10867702 MDR-TB lineage2.2.1 None
ERR10868931 MDR-TB lineage2.2.1 None
ERR12549780 Sensitive lineage4.8 None
ERR2653040 Other lineage4.1.1.1 None
ERR5987238 RR-TB lineage2.2.1 None
ERR7801287 Sensitive lineage4.3.3 None
ERR2653117 Pre-XDR-TB lineage4.3.4.2 None
ERR7801320 Sensitive lineage4.3.4.2.1 None
SRR12882666 RR-TB lineage3 None
SRR12882094 Sensitive lineage1.2.1.2 None
SRR12882196 Sensitive lineage1.2.1.2 None
ERR7801309 Sensitive lineage4.3.4.2.1 None
ERR12549577 Sensitive lineage4.3.3 None
SRR12882116 Sensitive lineage1.2.1.2 None
ERR5987454 MDR-TB lineage2.2.2 None
ERR7801292 Sensitive lineage4.3.4.2.1 None
ERR7801308 Sensitive lineage2.2.1 None
SRR12882477 Sensitive lineage1.2.1.2.1 None
SRR16295782 Other lineage2.2.1 None
ERR10877862 MDR-TB lineage4.8 None
SRR11823427 Sensitive lineage4.9 None
SRR12882605 Sensitive lineage3.1.1 None
ERR7801300 HR-TB lineage4.9.1 None
ERR7801293 Sensitive lineage4.3.4.2.1 None
ERR10869170 Pre-XDR-TB lineage4.3.3 None
ERR11243565 Pre-XDR-TB lineage2.2.1 None
ERR10877896 Pre-XDR-TB lineage4.3.3 None
ERR10877880 MDR-TB lineage4.3.3 None
ERR6336763 Sensitive lineage1.2.1.2.1 None
ERR11243553 MDR-TB lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR12549782 Sensitive lineage4.3.3 None
ERR10869436 MDR-TB lineage4.3.3 None
ERR11049670 Sensitive lineage4.8 None
ERR11243554 MDR-TB lineage2.2.1 None
ERR10869162 MDR-TB lineage4.3.3 None
SRR12882104 Sensitive lineage1.2.1.2 None
ERR12544298 RR-TB lineage4.8 None
ERR12544380 HR-TB lineage2.2.1;lineage4.1.2.1 None
SRR12882350 Sensitive lineage3.1.1 None
SRR12882544 Sensitive lineage1.1.2 None
SRR12882431 Sensitive lineage1.2.1.2 None
ERR10877866 MDR-TB lineage4.3.3 None
ERR9119706 Sensitive lineage4.1.2 None
ERR12916919 XDR-TB lineage2.2.1 None
ERR12916927 XDR-TB lineage4.3.3 None
ERR12916911 Pre-XDR-TB lineage2.2.1 None
ERR12916909 XDR-TB lineage2.2.1 None
ERR12916907 Pre-XDR-TB lineage2.2.1 None
SRR28045084 Sensitive lineage1.1.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR12882418 Sensitive lineage3.1.1 None
ERR12545827 RR-TB lineage2.2.1 None
ERR10877865 MDR-TB lineage2.2.1 None
SRR21277028 Sensitive lineage2.2.1 None
SRR12882428 Sensitive lineage1.2.1.2.1 None
SRR12882328 Sensitive lineage3.1.1 None
SRR12882339 Sensitive lineage3.1.1 None
SRR12882442 Sensitive lineage1.2.1.2 None
SRR12882681 Sensitive lineage1.1.2 None
ERR12545825 Sensitive lineage4.2.1.1 None
SRR12882092 Sensitive lineage1.2.1.2 None
SRR12212959 HR-TB lineage4.9 None
ERR2120283 MDR-TB lineage4.6.5 None
ERR12545823 RR-TB lineage4.8 None
SRR9613549 Sensitive lineage4.1.1.1 None
ERR11243561 Pre-XDR-TB lineage2.2.1 None
SRR12882118 HR-TB lineage1.2.1.2 None
ERR7801316 Sensitive lineage2.2.1 None
ERR7801313 Other lineage4.3.4.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR12882604 Sensitive lineage1.1.2 None
ERR11243572 MDR-TB lineage4.8 None
ERR7801321 Sensitive lineage4.3.4.2.1 None
ERR7801311 Sensitive lineage4.3.4.2.1 None
ERR12545821 Sensitive lineage4.3.3 None
ERR12549711 Sensitive lineage4.8 None
ERR11243570 MDR-TB lineage2.2.1 None
ERR10868625 Pre-XDR-TB lineage4.3.3 None
SRR12882323 Sensitive lineage1.2.2.2 None
SRR12882093 Sensitive lineage1.2.1.2 None
ERR10869501 MDR-TB lineage4.3.3 None
SRR12882419 Sensitive lineage3.1.1 None
SRR12882661 Sensitive lineage1.1.2 None
ERR12546193 Sensitive lineage4.3.3;lineage4.8 None
ERR5987257 MDR-TB lineage2.2.2 None
ERR12544387 Sensitive lineage4.3.3 None
ERR10877870 Pre-XDR-TB lineage4.3.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR12882481 MDR-TB lineage1.2.1.2 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR5987314 MDR-TB lineage2.2.2 None
SRR12882437 Other lineage1.2.1.2 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR12882349 Sensitive lineage1.1.2 None
ERR7801315 Sensitive lineage2.2.1 None
SRR12882417 Sensitive lineage3.1.1 None
SRR6044875 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR23961539 Other La1.7.1 None
ERR7801323 Sensitive lineage4.1.2.1 None
SRR12882538 Sensitive lineage1.1.2 None
SRR3675222 Other La1.7 None
SRR12882344 Sensitive lineage3.1.1 None
SRR12882463 Sensitive lineage1.1.2 None
ERR6362028 MDR-TB lineage2.2.1 None
SRR12882100 Sensitive lineage1.2.1.2 None
ERR12544390 RR-TB lineage4.2.1.1 None
SRR12882111 Other lineage1.2.1.2 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR7801301 Sensitive lineage4.3.4.2.1 None
ERR7801312 Sensitive lineage2.2.1 None
ERR10868818 Pre-XDR-TB lineage2.2.1 None
ERR12544388 Sensitive lineage4.8 None
SRR21277046 Sensitive lineage2.2.1 None
SRR12882322 Sensitive lineage3.1.1 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR12882114 Sensitive lineage1.2.1.2 None
ERR11243571 MDR-TB lineage2.2.1 None
SRR12882670 Sensitive lineage3.1.1 None
ERR9119759 MDR-TB lineage2.2.2 None
ERR10869097 MDR-TB lineage4.3.3 None
ERR12549652 Sensitive lineage4.3.3 None
ERR11243556 MDR-TB lineage2.2.1 None
ERR7801310 Sensitive lineage4.3.4.2.1 None
ERR5987278 MDR-TB lineage4.1.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR6336734 Sensitive lineage1.2.1.2.1 None
ERR12549777 RR-TB lineage4.8 None
SRR12882333 Other lineage3 None
SRR21277209 Sensitive lineage2.2.1 None
ERR12549784 Sensitive lineage4.2.1 None
ERR5866472 MDR-TB lineage2.2.1 None
ERR12544299 Other lineage2.2.1 None
ERR9119772 MDR-TB lineage2.2.1 None
SRR12882440 Sensitive lineage1.2.1.2 None
ERR7801295 Sensitive lineage4.9.1 None
SRR12882334 Sensitive lineage3.1.1 None
SRR12882343 Sensitive lineage1.1.3.2 None
ERR11243579 MDR-TB lineage2.2.1 None
ERR10868185 Pre-XDR-TB lineage2.2.1 None
SRR12882662 Sensitive lineage1.1.2 None
ERR10877891 MDR-TB lineage4.3.3 None
SRR12882113 Sensitive lineage1.2.1.2 None
ERR9119701 MDR-TB lineage4.1.2 None
ERR10877882 MDR-TB lineage4.2.1;lineage4.3.3 None
ERR5987460 Sensitive lineage4.1.2 None
ERR12544386 Sensitive lineage4.2.1 None
ERR6362271 MDR-TB lineage2.2.1 None
SRR12882098 Sensitive lineage1.2.1.2 None
ERR7801306 Sensitive lineage2.2.1 None
SRR12882329 Sensitive lineage3.1.1 None
SRR12882195 Sensitive lineage1.2.1.2 None
ERR11243568 MDR-TB lineage2.2.1 None
ERR9119777 MDR-TB lineage2.2.2 None
ERR12544442 RR-TB lineage4.8 None
ERR7801289 Sensitive lineage4.3.4.2.1 None
SRR12882340 Sensitive lineage3.1.1 None
ERR7801304 Sensitive lineage4.3.4.2.1 None
ERR4769474 HR-TB lineage4.9 None
ERR9119853 MDR-TB lineage2.2.1 None
ERR10877856 MDR-TB lineage2.2.1 None
ERR12544389 Sensitive lineage2.2.1 None
SRR12882664 Sensitive lineage3 None
ERR5866510 MDR-TB lineage4.3.3 None
ERR12544446 Sensitive lineage4.2.1 None
ERR9119747 MDR-TB lineage2.2.1 None
ERR10867699 MDR-TB lineage2.2.1 None
ERR9119792 MDR-TB lineage2.2.2 None
SRR12882096 Sensitive lineage1.2.1.2 None
ERR7801294 Sensitive lineage4.3.4.2 None
ERR9119697 MDR-TB lineage2.2.2 None
ERR10877886 MDR-TB lineage2.2.1 None
ERR10869423 Pre-XDR-TB lineage2.2.1 None
SRR12882200 HR-TB lineage1.2.1.2 None
ERR10867591 MDR-TB lineage4.2.1.1 None
ERR12916908 Pre-XDR-TB lineage2.2.1 None
ERR12916921 Pre-XDR-TB lineage2.2.1 None
ERR11243569 MDR-TB lineage2.2.1 None
DRR305355 Other La1.2.BCG None
SRR12882337 Sensitive lineage3.1.1 None
ERR10869438 MDR-TB lineage2.2.1 None
ERR7801318 Sensitive lineage4.4.1.1 None
ERR5987432 MDR-TB lineage2.2.2 None
SRR15315806 Sensitive lineage2.2.1 None