EBG00000313339 - n.771C>T


Drug resistance types
192 Sensitive 9 RR-TB 23 HR-TB 101 MDR-TB 37 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
La1.8.1 4
lineage4.3.3 17
lineage4.1.1 2
lineage4.5 6
lineage4.1.2.1 13
lineage2.2.2 13
lineage2.2.1 149
La1.2.BCG 1
lineage1.2.1.2.1 8
lineage1.2.2.2 2
lineage4.3.3;lineage4.2.1 1
lineage3 10
lineage4.6.1.2 1
lineage4 1
lineage6.3.2 2
lineage6.3.1 1
lineage5 1
lineage4.1 1
lineage4.1.2 5
lineage2.2.1.1 5
lineage1.2.1.2 32
lineage1.2.1 1
6
lineage4.1.1.3 2
lineage4.9.1 2
lineage4.3.4.2.1 12
lineage4.3.4.2 3
lineage4.4.1.1 3
lineage4.9 10
lineage4.6.2.2 1
lineage3.1.1 21
lineage1.1.3.2 1
lineage1.1.2 12
lineage1.1.3 1
lineage2.1 3
La1.7.1 2
lineage4.2.2 2
lineage4.4.2 4
lineage2.2 1
lineage4.8 20
lineage4.2.1 2
lineage4.2.1.1 1
lineage4.7 4
lineage4.2.2.1 1
lineage6.2.2 1
lineage4.4 1
lineage4.8.2 1
lineage1.1.1.1 1
spoligotype Counts
spoligotype Count
None 394
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5087711 Other La1.8.1 None
ERR5165803 Sensitive lineage4.3.3 None
SRR9613539 MDR-TB lineage4.3.3 None
SRR9613549 Sensitive lineage4.1.1 None
SRR9613543 Sensitive lineage4.5 None
SRR9613550 HR-TB lineage4.1.2.1 None
DRR188685 Sensitive lineage2.2.2 None
SRR7517745 MDR-TB lineage2.2.1 None
DRR305355 Other La1.2.BCG None
DRR188753 Sensitive lineage1.2.1.2.1 None
ERR10869423 Pre-XDR-TB lineage2.2.1 None
ERR10877856 MDR-TB lineage2.2.1 None
ERR10868185 Pre-XDR-TB lineage2.2.1 None
ERR10877863 MDR-TB lineage2.2.1 None
ERR10867699 MDR-TB lineage2.2.1 None
ERR10877879 MDR-TB lineage2.2.1 None
ERR4798154 Other lineage1.2.2.2 in
ERR10877886 MDR-TB lineage2.2.1 None
ERR123924 Sensitive lineage4.1.2.1 None
ERR4627366 Other La1.8.1 None
ERR10877882 MDR-TB lineage4.3.3;lineage4.2.1 None
ERR117658 Sensitive lineage3 None
ERR1413483 HR-TB lineage4.6.1.2 None
ERR4188171 Other La1.8.1 None
ERR4627364 Other La1.8.1 None
ERR4769474 HR-TB lineage4 None
ERR5336160 Other lineage6.3.2 None
ERR4798862 Pre-XDR-TB lineage2.2.1 in
ERR5336147 Sensitive lineage6.3.1 None
ERR5863877 MDR-TB lineage2.2.1 None
ERR5336170 HR-TB lineage5 None
ERR5863722 MDR-TB lineage2.2.1 None
ERR5336165 Sensitive lineage6.3.2 None
ERR5863740 MDR-TB lineage2.2.1 None
ERR5863858 MDR-TB lineage2.2.1 None
ERR5864102 Pre-XDR-TB lineage2.2.1 None
ERR5864062 MDR-TB lineage2.2.1 None
ERR5864113 Pre-XDR-TB lineage2.2.1 None
ERR5864108 MDR-TB lineage2.2.1 None
ERR5864242 MDR-TB lineage2.2.1 None
ERR5864161 MDR-TB lineage2.2.1 None
ERR5864159 MDR-TB lineage2.2.1 None
ERR5864615 MDR-TB lineage2.2.1 None
ERR5864598 MDR-TB lineage2.2.1 None
ERR5864537 Pre-XDR-TB lineage2.2.1 None
ERR5864562 MDR-TB lineage2.2.1 None
ERR5864660 Pre-XDR-TB lineage2.2.1 None
ERR5864641 Pre-XDR-TB lineage2.2.1 None
ERR5864649 MDR-TB lineage2.2.1 None
ERR5864718 Pre-XDR-TB lineage2.2.1 None
ERR5864685 MDR-TB lineage2.2.1 None
ERR5864705 MDR-TB lineage2.2.1 None
ERR5865287 Pre-XDR-TB lineage2.2.1 None
ERR5864947 Pre-XDR-TB lineage2.2.1 None
ERR5864968 MDR-TB lineage2.2.1 None
ERR5865179 MDR-TB lineage2.2.1 None
ERR5865307 MDR-TB lineage2.2.1 None
ERR5865133 Pre-XDR-TB lineage4.1.2.1 None
ERR5865437 MDR-TB lineage2.2.1 None
ERR5865372 MDR-TB lineage2.2.1 None
ERR5866531 MDR-TB lineage2.2.1 None
ERR5865972 MDR-TB lineage2.2.1 None
ERR5866472 MDR-TB lineage2.2.1 None
ERR5866495 MDR-TB lineage2.2.1 None
ERR5866510 MDR-TB lineage4.3.3 None
ERR5865950 MDR-TB lineage2.2.1 None
ERR5866103 Pre-XDR-TB lineage4.3.3 None
ERR5866453 MDR-TB lineage4.3.3 None
ERR5866483 Pre-XDR-TB lineage2.2.1 None
ERR5866520 MDR-TB lineage4.3.3 None
ERR5866563 Pre-XDR-TB lineage2.2.1 None
ERR5917675 Sensitive lineage4.1 by
ERR5987278 MDR-TB lineage4.1.2 None
ERR5987238 RR-TB lineage2.2.1 None
ERR5987257 MDR-TB lineage2.2.2 None
ERR5987432 MDR-TB lineage2.2.2 None
ERR5987314 MDR-TB lineage2.2.2 None
ERR5987455 RR-TB lineage2.2.1.1 None
ERR5987460 Sensitive lineage4.1.2 None
ERR5987454 MDR-TB lineage2.2.2 None
ERR6336796 MDR-TB lineage1.2.1.2 None
ERR6336732 Sensitive lineage1.2.1.2.1 None
ERR6336763 Sensitive lineage1.2.1 None
ERR6336734 Sensitive lineage1.2.1.2.1 None
ERR6336766 Other lineage1.2.1.2.1 None
ERR6362271 MDR-TB lineage2.2.1 None
ERR6362028 MDR-TB lineage2.2.1 None
ERR6336803 Other lineage1.2.1.2.1 None
ERR6358991 HR-TB None
ERR6362460 MDR-TB lineage2.2.1 None
ERR6397146 Sensitive lineage3 None
ERR6362628 Pre-XDR-TB lineage2.2.1 None
ERR6362894 MDR-TB lineage4.1.1.3 None
ERR7801287 Sensitive lineage4.3.3 None
ERR7801295 Sensitive lineage4.9.1 None
ERR7801302 Sensitive lineage4.3.4.2.1 None
ERR7801308 Sensitive lineage2.2.1 None
ERR7801306 Sensitive lineage2.2.1 None
ERR7801289 Sensitive lineage4.3.4.2.1 None
ERR7801292 Sensitive lineage4.3.4.2.1 None
ERR7801294 Sensitive lineage4.3.4.2 None
ERR7801312 Sensitive lineage2.2.1 None
ERR7801293 Sensitive lineage4.3.4.2.1 None
ERR7801310 Sensitive lineage4.3.4.2.1 None
ERR7801301 Sensitive lineage4.3.4.2.1 None
ERR7801313 Other lineage4.3.4.2.1 None
ERR7801300 HR-TB lineage4.9.1 None
ERR7801316 Sensitive lineage2.2.1 None
ERR7801311 Sensitive lineage4.3.4.2.1 None
ERR7801309 Sensitive lineage4.3.4.2.1 None
ERR7801320 Sensitive lineage4.3.4.2.1 None
ERR7801304 Sensitive lineage4.3.4.2.1 None
ERR7801327 Sensitive lineage4.3.4.2 None
ERR7801323 Sensitive lineage4.1.2.1 None
ERR8158065 Sensitive lineage2.2.1 None
ERR8158043 Sensitive lineage2.2.1 None
ERR7801318 Sensitive lineage4.4.1.1 None
ERR7801321 Sensitive lineage4.3.4.2.1 None
ERR8774561 Sensitive lineage2.2.1 None
ERR8774320 Sensitive lineage4.3.3 None
ERR9119696 MDR-TB lineage4.1.1.3 None
ERR9119697 MDR-TB lineage2.2.2 None
ERR9119706 Sensitive lineage4.1.2 None
ERR9119704 RR-TB lineage2.2.1.1 None
ERR9119759 MDR-TB lineage2.2.2 None
ERR9119701 MDR-TB lineage4.1.2 None
ERR9119747 MDR-TB lineage2.2.1 None
ERR9119716 Pre-XDR-TB lineage2.2.1 None
SRR11823427 Sensitive lineage4.9 None
ERR9119764 RR-TB lineage2.2.1 None
ERR9119792 MDR-TB lineage2.2.2 None
ERR9285847 Sensitive lineage4.4.1.1 None
SRR11823430 Sensitive lineage2.2.1.1 None
ERR9119777 MDR-TB lineage2.2.2 None
ERR9119772 MDR-TB lineage2.2.1 None
ERR9119853 MDR-TB lineage2.2.1 None
SRR11444393 Sensitive lineage4.6.2.2 None
SRR12212959 HR-TB lineage4.9 None
SRR12882095 Sensitive lineage1.2.1.2 None
SRR12882098 Sensitive lineage1.2.1.2 None
SRR12882097 Sensitive lineage1.2.1.2 None
SRR12882096 Sensitive lineage1.2.1.2 None
SRR12882094 Sensitive lineage1.2.1.2 None
SRR12882093 Sensitive lineage1.2.1.2 None
SRR12882092 Sensitive lineage1.2.1.2 None
SRR12882100 Sensitive lineage1.2.1.2 None
SRR12882107 Sensitive lineage1.2.1.2 None
SRR12882104 Sensitive lineage1.2.1.2 None
SRR12882103 Sensitive lineage1.2.1.2 None
SRR12882113 Sensitive lineage1.2.1.2 None
SRR12882111 Other lineage1.2.1.2 None
SRR12882102 Sensitive lineage1.2.1.2 None
SRR12882115 HR-TB lineage1.2.1.2 None
SRR12882106 Sensitive lineage1.2.1.2 None
SRR12882110 Other lineage1.2.1.2 None
SRR12882109 Sensitive lineage1.2.1.2 None
SRR12882116 Sensitive lineage1.2.1.2 None
SRR12882200 HR-TB lineage1.2.1.2 None
SRR12882118 HR-TB lineage1.2.1.2 None
SRR12882196 Sensitive lineage1.2.1.2 None
SRR12882195 Sensitive lineage1.2.1.2 None
SRR12882114 Sensitive lineage1.2.1.2 None
SRR12882340 Sensitive lineage3.1.1 None
SRR12882333 Other lineage3 None
SRR12882322 Sensitive lineage3.1.1 None
SRR12882328 Sensitive lineage3.1.1 None
SRR12882323 Sensitive lineage1.2.2.2 None
SRR12882337 Sensitive lineage3.1.1 None
SRR12882329 Sensitive lineage3.1.1 None
SRR12882339 Sensitive lineage3.1.1 None
SRR12882334 Sensitive lineage3.1.1 None
SRR12882350 Sensitive lineage3.1.1 None
SRR12882344 Sensitive lineage3.1.1 None
SRR12882418 Sensitive lineage3.1.1 None
SRR12882343 Sensitive lineage1.1.3.2 None
SRR12882349 Sensitive lineage1.1.2 None
SRR12882417 Sensitive lineage3.1.1 None
SRR12882412 Sensitive lineage3.1.1 None
SRR12882463 Sensitive lineage1.1.2 None
SRR12882431 Sensitive lineage1.2.1.2 None
SRR12882440 Sensitive lineage1.2.1.2 None
SRR12882428 Sensitive lineage1.2.1.2.1 None
SRR12882441 Sensitive lineage1.2.1.2 None
SRR12882429 Sensitive lineage1.2.1.2 None
SRR12882437 Other lineage1.2.1.2 None
SRR12882478 Sensitive lineage1.1.3 None
SRR12882481 MDR-TB lineage1.2.1.2 None
SRR12882419 Sensitive lineage3.1.1 None
SRR12882442 Sensitive lineage1.2.1.2 None
SRR12882602 Sensitive lineage3.1.1 None
SRR12882544 Sensitive lineage1.1.2 None
SRR12882477 Sensitive lineage1.2.1.2.1 None
SRR12882538 Sensitive lineage1.1.2 None
SRR12882660 Sensitive lineage3 None
SRR12882605 Sensitive lineage3.1.1 None
SRR12882661 Sensitive lineage1.1.2 None
SRR12882604 Sensitive lineage1.1.2 None
SRR12882673 Sensitive lineage1.1.2 None
SRR12882681 Sensitive lineage1.1.2 None
SRR12882699 Sensitive lineage1.1.2 None
SRR12882662 Sensitive lineage1.1.2 None
SRR12882670 Sensitive lineage3.1.1 None
SRR12882482 Sensitive lineage1.2.1.2.1 None
SRR12882666 Sensitive lineage3 None
SRR12882664 Sensitive lineage3 None
SRR1710063 Sensitive lineage2.1 cn
SRR15217982 HR-TB lineage4.1.2.1 None
SRR15315806 Sensitive lineage2.2.1 None
SRR16295782 Other lineage2.2.1 None
SRR16295812 Other lineage2.2.1 None
SRR16295814 Other lineage2.2.1 None
SRR16295778 Sensitive lineage2.2.1 None
SRR16295732 Other lineage2.2.1 None
SRR16295789 Other lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR1710057 Other lineage2.1 None
SRR18002888 RR-TB lineage2.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002884 Pre-XDR-TB lineage2.2.1 None
SRR18002892 Pre-XDR-TB lineage2.2.1 None
SRR18002877 Pre-XDR-TB lineage2.2.1 None
SRR18002886 MDR-TB lineage2.2.1 None
SRR18002907 MDR-TB lineage2.2.1 None
SRR18002898 RR-TB lineage2.2.1 None
SRR18002900 Pre-XDR-TB lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR18002893 MDR-TB lineage2.2.1 None
SRR18002897 Pre-XDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002932 Pre-XDR-TB lineage2.2.1 None
SRR18002940 Sensitive lineage2.2.1 None
SRR18002952 Sensitive lineage2.2.1 None
SRR18002939 Sensitive lineage2.2.2 None
SRR18002936 Sensitive lineage2.2.1 None
SRR18002950 MDR-TB lineage2.2.1 None
SRR18002946 Sensitive lineage2.2.1 None
SRR18002965 Sensitive lineage2.2.1 None
SRR18002969 Sensitive lineage2.2.1 None
SRR18003026 Sensitive lineage2.2.1 None
SRR18002966 Sensitive lineage2.2.1.1 None
SRR18002970 Sensitive lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18003006 Sensitive lineage4.5 None
SRR18003017 MDR-TB lineage4.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003016 Pre-XDR-TB lineage2.2.1 None
SRR18003025 Sensitive lineage2.2.1 None
SRR18002979 Sensitive lineage2.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR18002996 MDR-TB lineage2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003003 MDR-TB lineage2.2.1 None
SRR18003005 RR-TB lineage2.2.1 None
SRR18003020 Sensitive lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18003037 Sensitive lineage4.5 None
SRR18003039 Sensitive lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003043 Pre-XDR-TB lineage2.2.2 None
SRR18054776 Pre-XDR-TB lineage2.2.1 None
SRR18003041 HR-TB lineage2.2.1 None
SRR18054775 MDR-TB lineage2.2.1 None
SRR21277046 Sensitive lineage2.2.1 None
SRR2100164 Sensitive lineage4.1.2.1 None
SRR2100224 Sensitive lineage3 None
SRR2100467 Sensitive lineage4.1.2.1 None
SRR21277028 Sensitive lineage2.2.1 None
SRR21576539 Pre-XDR-TB lineage2.2.2 None
SRR21277209 Sensitive lineage2.2.1 None
SRR21576579 MDR-TB lineage2.2.1 None
SRR21576640 MDR-TB lineage4.5 None
SRR21576616 RR-TB lineage2.2.1 None
SRR21576644 MDR-TB lineage2.2.1 None
ERR11243551 MDR-TB lineage2.2.1 None
SRR21576733 MDR-TB lineage4.5 None
SRR21658566 HR-TB lineage4.4.2 None
SRR21677860 Sensitive lineage2.2 None
ERR11243550 MDR-TB lineage2.2.1 None
ERR11243552 MDR-TB lineage2.2.1 None
ERR11243556 MDR-TB lineage2.2.1 None
ERR11243555 MDR-TB lineage2.2.1 None
ERR11243554 MDR-TB lineage2.2.1 None
ERR11243553 MDR-TB lineage2.2.1 None
ERR11243570 MDR-TB lineage2.2.1 None
ERR11243561 Pre-XDR-TB lineage2.2.1 None
ERR11243562 MDR-TB lineage2.2.1 None
ERR11243558 MDR-TB lineage2.2.1 None
ERR11243557 Pre-XDR-TB lineage2.2.1 None
ERR11243565 Pre-XDR-TB lineage2.2.1 None
ERR11243571 MDR-TB lineage2.2.1 None
ERR11243569 MDR-TB lineage2.2.1 None
ERR11243576 Sensitive lineage4.1.2.1 None
ERR11243568 MDR-TB lineage2.2.1 None
ERR11243579 MDR-TB lineage2.2.1 None
ERR11243573 MDR-TB lineage2.2.1 None
ERR11243572 MDR-TB lineage4.8 None
ERR11243575 MDR-TB lineage2.2.1 None
ERR11243577 MDR-TB lineage2.2.1 None
ERR11243578 MDR-TB lineage2.2.1 None
ERR11243581 Pre-XDR-TB lineage2.2.1 None
ERR11243584 MDR-TB lineage4.3.3 None
ERR11243580 MDR-TB lineage2.2.1 None
ERR11243585 MDR-TB lineage2.2.1 None
ERR11243582 MDR-TB lineage4.2.1 None
ERR11243595 Sensitive lineage4.3.3 None
ERR11243583 MDR-TB lineage4.3.3 None
ERR11243601 Sensitive lineage2.2.1 None
ERR11243590 Other lineage4.8 None
ERR11243597 Sensitive lineage4.1.2.1 None
ERR11243594 Sensitive lineage4.8 None
ERR11243600 Sensitive lineage4.3.3 None
ERR11243599 Sensitive lineage2.2.1 None
ERR11243602 Sensitive lineage4.8 None
ERR11243603 Sensitive lineage2.2.1 None
ERR11243614 Sensitive lineage4.8 None
ERR11243608 Sensitive lineage2.2.1 None
ERR11243607 Sensitive lineage2.2.1 None
ERR11243606 Sensitive lineage4.8 None
ERR11243615 Sensitive lineage4.8 None
ERR11243619 Sensitive lineage2.2.1 None
ERR11243611 Sensitive lineage4.1.2.1 None
ERR11243609 Sensitive lineage2.2.1 None
ERR11243616 Sensitive lineage2.2.1 None
ERR11243612 Sensitive lineage4.8 None
ERR11243620 Sensitive lineage4.8 None
ERR11243617 Sensitive lineage4.2.1.1 None
ERR11243621 Sensitive lineage4.8 None
ERR11243622 Sensitive lineage4.3.3 None
ERR11243613 Sensitive lineage4.8 None
ERR11243618 Sensitive lineage4.1.2.1 None
ERR11243625 Sensitive lineage4.8 None
ERR11243638 Sensitive lineage4.2.1 None
ERR11243627 Sensitive lineage4.1.2 None
ERR11243626 Sensitive lineage4.7 None
ERR11243629 Sensitive lineage4.8 None
ERR4815686 Sensitive lineage4.9 None
ERR1577245 HR-TB lineage2.2.1 None
ERR1465957 Sensitive lineage4.7 None
ERR4815766 Sensitive lineage4.8 gb
ERR2041798 MDR-TB lineage4.2.2.1 rs
SRR3675488 HR-TB None
SRR3675222 Other None
SRR3416776 Other lineage2.1 None
ERR1950083 Sensitive lineage4.8 None
ERR176751 HR-TB None
ERR2229536 Sensitive lineage4.8 None
ERR4814844 Sensitive lineage4.7 gb
SRR3675509 Other lineage4.9 None
ERR11049670 Sensitive lineage4.8 None
ERR4816984 Sensitive lineage1.1.2 gb
ERR212121 HR-TB None
ERR4817222 Sensitive lineage4.9 None
ERR2229599 Sensitive lineage4.8 None
SRR4033407 Sensitive lineage2.2.1 None
ERR2245388 Sensitive lineage3.1.1 no
ERR2245389 Sensitive lineage3.1.1 no
ERR2245402 Sensitive lineage3.1.1 no
ERR4818754 Sensitive lineage6.2.2 None
ERR2245409 HR-TB lineage3.1.1 no
ERR2245422 Sensitive lineage3.1.1 no
ERR4817892 Sensitive lineage4.8 gb
ERR4817964 RR-TB lineage4.1.2.1 gb
SRR4034816 Sensitive lineage2.2.1 None
ERR228102 Sensitive lineage4.1.2.1 None
ERR4818215 Sensitive lineage4.9 None
ERR2512494 Other lineage4.3.3 gb
ERR4818627 Other lineage3 None
ERR4818859 Sensitive lineage4.8 gb
SRR5341260 Sensitive lineage2.2.1 None
ERR2513848 Sensitive lineage4.4.2 gb
ERR2514048 Sensitive lineage4.4 gb
ERR4819649 Sensitive lineage4.9 None
ERR2653040 Other lineage4.1.1 None
ERR4820559 Sensitive lineage4.9 None
ERR2653102 Pre-XDR-TB lineage4.7 None
ERR2653110 MDR-TB lineage4.3.3 None
ERR2653117 Pre-XDR-TB lineage4.3.4.2 None
SRR6044875 HR-TB lineage4.9 None
ERR2653176 MDR-TB lineage4.3.3 None
SRR6045519 HR-TB None
ERR4821270 Sensitive lineage1.1.2 gb
SRR6045769 Sensitive lineage4.8.2 gb
ERR2653172 Pre-XDR-TB lineage4.3.3 None
ERR2815606 Other La1.7.1 None
SRR6046259 Sensitive lineage4.9 None
ERR4831525 Pre-XDR-TB lineage3 pk
SRR6046803 Sensitive lineage3 gb
ERR2886463 Sensitive lineage2.2.1 None
ERR2486967 Sensitive lineage4.4.1.1 None
ERR4831716 HR-TB lineage1.1.1.1 None