Rv0006 - c.1755C>G


Drug resistance types
17 Sensitive 4 RR-TB 53 HR-TB 15 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 122 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 13
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 6
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9;lineage6.3 9
lineage1.1.3.3 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9;lineage7 4
lineage4.6.1.1 2
lineage2.2.1 5
La3;lineage2.2.2 1
lineage4.9 41
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.9 3
lineage2.2.2 1
La1.6;La3;lineage4.9 1
La1.2;La1.8.1 1
La3;lineage4.3.4 1
lineage4 3
La3;lineage4.9 5
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 10
lineage4.8 3
lineage4.1.1.3 2
lineage5.2 2
14
lineage4.3.4.2.1 2
La1.2.BCG 1
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage2.2.2;lineage4 1
lineage4.2;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.3.3 1
lineage2.2 4
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
La1.7;lineage4.9 5
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.7 1
lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage1 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.9 1
lineage4.1.1.1 1
lineage4.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.6.2.2 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
La3;lineage1.1.2 1
lineage4.1.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.3.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage9 1
lineage3 2
La3;lineage4.8 1
lineage2.1 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage6 1
spoligotype Counts
spoligotype Count
None 215
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29231597 Sensitive lineage1.1.3.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR20969731 Other lineage2.2.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR7496471 Sensitive lineage4 None
SRR3675248 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR11465025 Other lineage4.1.1.3 None
ERR13285191 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR9117709 Other None
SRR14782405 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR9787197 Other None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675457 Other lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR3283042 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR387051 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6789626 Other None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6044876 Sensitive lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR7496509 Other None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR3675488 Other La1.7;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR7496472 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR1184381 MDR-TB None
ERR2514692 Other None
ERR234659 Other None
SRR10808730 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
ERR13285192 Sensitive lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180137 Other lineage2.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR26399239 Sensitive lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR29016780 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR18213713 HR-TB None
SRR6044875 Sensitive lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
SRR20969708 HR-TB lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR6832563 Sensitive lineage4.1.2.1 None
ERR2027263 Other lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675582 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR3675280 RR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR990545 Other lineage3 None
ERR108471 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
ERR3797046 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR1199132 Sensitive lineage4.6.1.1 None