Rv1173 - c.2401_2403delGAAinsAC


Drug resistance types
0 Sensitive 13 RR-TB 22 HR-TB 38 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 36 Other
lineage Counts
lineage Count
lineage4.9 25
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.9 5
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 3
lineage4.9;lineage7 3
M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage3 1
La3;lineage4.9 3
5
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage3 1
lineage4.1.2.1 1
lineage2.2.1 3
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
lineage3.1;lineage9 1
La3;M.canetti;lineage4.9 2
lineage2.1;lineage6.3 1
lineage2.2 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage3.1.2.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage1.1 1
La1.7;lineage4.9 1
spoligotype Counts
spoligotype Count
None 114
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1196583 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR11252612 Other La3;lineage4.9 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR26399973 Other La3;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4821053 RR-TB lineage3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR13861153 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1184381 MDR-TB None
ERR987722 MDR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797083 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045526 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR1169306 Other La3;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR2514692 Other None
SRR25827682 Other None