lineage | Count |
---|---|
La1.8.1 | 1 |
14 | |
lineage4 | 54 |
lineage4.9 | 31 |
lineage4.1.2.1 | 7 |
lineage5.1.2 | 1 |
lineage4;lineage3.1 | 1 |
La1.3 | 3 |
La1.2 | 1 |
lineage4.9;La1.3 | 1 |
lineage2.2.1.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage6 | 1 |
lineage4.3.3 | 2 |
lineage3 | 2 |
La1.7.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage2.2.1 | 3 |
lineage4.1.1 | 1 |
lineage4.1.1.2 | 1 |
lineage1.1.2 | 2 |
lineage4.2.1 | 2 |
lineage4.3.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 138 |
ID | Drug resistance | Lineage | Country iso2 | ERR3439441 | Other | La1.8.1 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR9787336 | Other | lineage6 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR16157123 | Other | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR21685103 | Sensitive | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819051 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR8217918 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR108471 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None |
---|