Rv0001 - c.805_807delTTGinsCC


Drug resistance types
16 Sensitive 3 RR-TB 21 HR-TB 11 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 46 Other
lineage Counts
lineage Count
lineage4 3
lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1 4
La3;lineage4.9 5
lineage4.9 36
La3;lineage1.1.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage4.9 3
lineage2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage3;lineage4.9 1
lineage5.1.4 1
3
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
La3;lineage2.1;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.1.2.1 2
lineage4.3.2.1 1
lineage3 1
lineage4.1.1.1 1
La3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
M.canetti;lineage4.2 1
lineage1.1.1;lineage4 1
lineage2.2 2
La1.7;lineage4.9 1
lineage3.1;lineage9 1
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2 1
lineage2.2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 99
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3275450 Other lineage4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341384 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3797047 MDR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR1184381 MDR-TB None
ERR2514692 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR5341323 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR1165699 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1175496 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR3675455 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR6045526 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None