EBG00000313339 - n.1349A>G
Drug resistance types
11 Sensitive
1 RR-TB
33 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| 37 | |
| lineage2.2.1.1 | 2 |
| La1.8.1 | 3 |
| lineage3 | 1 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 4 |
| lineage9;lineage3.1 | 1 |
| lineage4.9 | 7 |
| lineage4.1 | 1 |
| lineage4 | 6 |
| lineage4.3.3 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| La2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172310 | HR-TB | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1791721 | Other | La1.8.1 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR4815234 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | ERR4814318 | Sensitive | lineage4.9 | None | SRR3675502 | Other | None | SRR3675488 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675222 | Other | None | ERR1035162 | Other | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2693230 | Other | None | SRR5341418 | Other | None | ERR4819725 | Sensitive | lineage4.9 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR2693254 | Other | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6511621 | HR-TB | None | SRR6832249 | Other | lineage2.2.1 | None | ERR2693257 | Other | None | SRR6044835 | Sensitive | lineage4 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3797027 | Other | La1.8.1 | None | ERR3439432 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR4772225 | Other | La1.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987722 | HR-TB | None |
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