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SRA data
EBG00000313339
- n.1349A>G
Drug resistance types
12 Sensitive
0 RR-TB
23 HR-TB
10 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
23 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
14
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
La1.7;lineage4.9
3
lineage4.6.2.2
2
La1.2.BCG
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage4.3.2.1
2
lineage6.1.1
2
lineage4.1.2.1
2
lineage4.9;lineage9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
70
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1035294
MDR-TB
lineage4.1.2.1
br
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11466044
Other
lineage4.1.1.3
None
ERR11488822
Pre-XDR-TB
lineage2.2.1;lineage4.1.2.1
None
ERR1213875
Sensitive
lineage4.3.3
de
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
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