lineage | Count |
---|---|
lineage4.9 | 98 |
lineage4.6.2.2 | 1 |
lineage4.1.2.1 | 6 |
1 | |
lineage4.3.4.2 | 1 |
lineage4 | 3 |
La3;M.canetti;lineage4.9 | 1 |
La1.8.1 | 1 |
La3;lineage4.9 | 7 |
lineage1.1.2 | 2 |
lineage2.2.1 | 7 |
lineage4.2.1 | 1 |
La1;lineage4.9 | 2 |
lineage1.1.3.1 | 1 |
lineage4.3.4.1 | 2 |
lineage3.1.3 | 1 |
La1.3 | 1 |
lineage5.2 | 2 |
lineage4.7 | 1 |
lineage3.1;lineage9 | 1 |
lineage2.2 | 1 |
lineage4.1.2 | 1 |
lineage4.8 | 2 |
lineage2.2.1.1 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
La3;lineage4 | 1 |
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage1.2.1.1 | 1 |
lineage6.1.3 | 1 |
lineage4.1.1.2 | 1 |
La1;lineage2;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.4.1.2 | 1 |
La1;lineage4.1.2 | 1 |
La1.2.BCG | 1 |
lineage4.8;lineage4.9 | 2 |
spoligotype | Count |
---|---|
None | 160 |
ID | Drug resistance | Lineage | Country iso2 | ERR926165 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR2101630 | Sensitive | lineage4.1.2.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR1159378 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR26159066 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4769514 | Other | La1.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR137286 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6982113 | Sensitive | lineage4.1.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR2101583 | Sensitive | lineage4.1.2.1 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR473332 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR6981908 | Sensitive | lineage4.1.2.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR21277146 | Sensitive | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None |
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