Rv3794 - c.-341G>C
Drug resistance types
27 Sensitive
0 RR-TB
99 HR-TB
11 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| 124 | |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage2.1 | 2 |
| lineage2.2.1 | 6 |
| lineage4.3 | 1 |
| lineage4.8 | 1 |
| lineage4 | 26 |
| lineage1.1 | 1 |
| lineage2.2 | 2 |
| lineage4.9 | 10 |
| lineage4;lineage1.1 | 1 |
| lineage4.1.2.1 | 3 |
| La1 | 2 |
| lineage3.1 | 4 |
| lineage2 | 2 |
| lineage3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.5 | 1 |
| lineage1.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6325445 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675311 | Other | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4816127 | Sensitive | lineage1.1 | None | ERR212034 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4818615 | Other | None | ERR4816656 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341333 | HR-TB | None | ERR2514692 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693239 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6045399 | Other | None | ERR278594 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | SRR6789626 | Other | None | SRR6046897 | Sensitive | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR3283027 | HR-TB | None | ERR5311090 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283024 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7535086 | Other | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR363421 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797083 | HR-TB | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR4188247 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811022 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9787197 | Other | None | ERR9117709 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1172728 | MDR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1172234 | Other | None | SRR1173153 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173400 | Other | None | SRR1173788 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1710057 | Other | lineage2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR15368973 | Other | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None |
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