lineage | Count |
---|---|
95 | |
lineage4.1.1.2 | 1 |
lineage4.9 | 12 |
lineage4 | 15 |
lineage2.2.1 | 2 |
lineage5.2 | 2 |
lineage4.3.2.1 | 1 |
La2 | 1 |
lineage2.2 | 2 |
La1 | 1 |
lineage2 | 2 |
lineage3.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.6.3 | 2 |
lineage1.1.2 | 1 |
lineage9;lineage3.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage6 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 145 |
ID | Drug resistance | Lineage | Country iso2 | ERR1035162 | Other | None | ERR234659 | HR-TB | None | SRR5341418 | Other | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044890 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | ERR4830353 | Other | None | SRR6045010 | Other | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR502524 | HR-TB | La2 | None | SRR8217918 | HR-TB | None | ERR502889 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323039 | HR-TB | None | ERR1034652 | Other | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283027 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283040 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3439432 | Other | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR4188247 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR5336148 | Other | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR736865 | HR-TB | None | ERR6358979 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808805 | Sensitive | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9125779 | Sensitive | lineage4.6.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173629 | Other | None | SRR1173153 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173400 | Other | None | SRR15368973 | Other | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR16058527 | Sensitive | lineage4.6.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR25827682 | Other | None | SRR3675465 | HR-TB | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR8692812 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR158583 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675234 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675550 | Other | None | ERR212001 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR2229393 | Other | lineage4.8 | None |
---|