Rv0006 - c.1728T>G


Drug resistance types
30 Sensitive 9 RR-TB 53 HR-TB 21 MDR-TB 0 Pre-XDR-TB 3 XDR-TB 72 Other
lineage Counts
lineage Count
lineage6.1.3 1
lineage2.2.1 8
lineage4.9 57
lineage2.2 5
lineage4.3.4.2.1 3
La1.7;lineage4.2 1
lineage2.2.1.1 3
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2 1
La1.7;lineage4.9 5
La3;lineage4.9 3
lineage4.6.2.2 4
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.1.2.1 5
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
lineage4.6.1.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 1
La1.6;La3;lineage4.9 1
M.canetti;lineage1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage5.2 3
M.canetti;lineage4.9 5
lineage4.4.1.2 1
lineage4.9;lineage7 1
3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.2;lineage4.9 2
lineage3.1;lineage9 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
lineage4.8.1 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1;lineage4.9 1
lineage4 2
lineage2.1;lineage4.9;lineage6.3 1
lineage4.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.2 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
La1.7.1 1
lineage4.1.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 1
lineage3 1
spoligotype Counts
spoligotype Count
None 188
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787153 Other lineage6.1.3 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6045892 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR29231479 RR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1181289 Other lineage2.2.1 None
ERR13285192 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046210 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR6045548 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1181020 Other lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR161037 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6044876 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6044942 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR29097066 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR26399239 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR6044875 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR3675446 RR-TB lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR736856 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR11044023 Other lineage5.2 None
ERR4797184 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR29096399 Sensitive lineage2.2.1 None
ERR3273109 HR-TB lineage4 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR176751 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6046485 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2514692 Other None
SRR10808730 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6832787 Sensitive lineage2.2.1 None
SRR6045555 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4796577 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4818929 HR-TB lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR5535933 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6358979 Other lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR990545 Other lineage3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None