Rv0006 - c.1728T>G
Drug resistance types
53 Sensitive
3 RR-TB
77 HR-TB
11 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 3 |
| lineage4.9 | 20 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1 | 14 |
| lineage2.2 | 10 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| 94 | |
| lineage4.2.1 | 1 |
| La1.7.1 | 1 |
| La1.8.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.3.4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 38 |
| lineage4.3 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.2.1.1 | 1 |
| lineage5.2 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 221 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14782405 | HR-TB | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675502 | Other | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR158583 | HR-TB | None | SRR3675270 | HR-TB | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675571 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675574 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341453 | Sensitive | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | ERR1035162 | Other | None | SRR5341418 | Other | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | ERR1023509 | Other | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR2514692 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2693230 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | ERR2693231 | Other | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045526 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045555 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046492 | Other | None | SRR6045327 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502889 | Other | None | ERR294266 | HR-TB | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7496471 | Sensitive | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323108 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1034652 | Other | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR11044023 | Sensitive | lineage5.2 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR4769457 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358991 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR702404 | HR-TB | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9119669 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR990545 | Other | lineage3 | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None |
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