Rv3261 - p.Val93Ala
Drug resistance types
0 Sensitive
1 RR-TB
21 HR-TB
4 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9 | 5 |
| lineage4.9 | 11 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| 2 | |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.8 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
| SRR14782054 | Other | lineage4.9 | None |
| SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
| ERR4815441 | HR-TB | lineage4.9 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| ERR3283018 | HR-TB | lineage4.9 | None |
| SRR6045233 | Other | M.canetti;lineage4.9 | None |
| ERR234659 | Other | None | |
| SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4799025 | Other | lineage4.8 | None |
| SRR6789626 | Other | None | |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| ERR13265748 | Other | lineage4.9;lineage6.3 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| ERR4811493 | HR-TB | lineage4.9 | None |
| SRR12142341 | HR-TB | lineage2.1 | None |
| ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
| SRR6044942 | HR-TB | lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
| ERR6359082 | Other | lineage4.9 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
